Gene : Cagra.0736s0040 C. grandiflora v1.1
Defline:  (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein Genomic Order:  40
Name:  ? Cagra.0736s0040 Secondary Identifier:  ? PAC:28899833
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0736s0040 0.5kb upstream 0.5kb upstream 5037 true Scaffold736: 174399-179435 Capsella grandiflora
Cagra.0736s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold736: 174399-174898 Capsella grandiflora
Cagra.0736s0040 0.5kb downstream 0.5kb downstream 5037 true Scaffold736: 174899-179935 Capsella grandiflora
Cagra.0736s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold736: 179436-179935 Capsella grandiflora
Cagra.0736s0040 1.0kb upstream 1.0kb upstream 5537 true Scaffold736: 173899-179435 Capsella grandiflora
Cagra.0736s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold736: 173899-174898 Capsella grandiflora
Cagra.0736s0040 1.0kb downstream 1.0kb downstream 5537 true Scaffold736: 174899-180435 Capsella grandiflora
Cagra.0736s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold736: 179436-180435 Capsella grandiflora
Cagra.0736s0040 2.0kb upstream 2.0kb upstream 6537 true Scaffold736: 172899-179435 Capsella grandiflora
Cagra.0736s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold736: 172899-174898 Capsella grandiflora
Cagra.0736s0040 2.0kb downstream 2.0kb downstream 6537 true Scaffold736: 174899-181435 Capsella grandiflora
Cagra.0736s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold736: 179436-181435 Capsella grandiflora
Cagra.0736s0040 5.0kb upstream 5.0kb upstream 9537 true Scaffold736: 169899-179435 Capsella grandiflora
Cagra.0736s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold736: 169899-174898 Capsella grandiflora
Cagra.0736s0040 5.0kb downstream 5.0kb downstream 9537 true Scaffold736: 174899-184435 Capsella grandiflora
Cagra.0736s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold736: 179436-184435 Capsella grandiflora
Cagra.0736s0040 10.0kb upstream 10.0kb upstream 14537 true Scaffold736: 164899-179435 Capsella grandiflora
Cagra.0736s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold736: 164899-174898 Capsella grandiflora
Cagra.0736s0040 10.0kb downstream 10.0kb downstream 14537 true Scaffold736: 174899-189435 Capsella grandiflora
Cagra.0736s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold736: 179436-189435 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375250 5261 Brassicaceae View MSA
123836951 5264 Brassicales-Malvales View MSA
124350030 5266 SBM View MSA
124239870 5268 Malvidae View MSA
124063578 5270 Rosid View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain