Protein Family : CTC-interacting domain 4 124350030

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  22

22 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g045896m.g (1 of 2) PTHR12854 - ATAXIN 2-RELATED C. sinensis v1.1 3775   scaffold00032: 533561-537335
AT3G14010 (1 of 1) KOG2375 - Protein interacting with poly(A)-binding protein A. thaliana TAIR10 CID4 4728   Chr3: 4636254-4640981
AT1G54170 (1 of 4) PTHR12854 - ATAXIN 2-RELATED A. thaliana TAIR10 CID3 4889   Chr1: 20221060-20225948
Thhalv10020519m.g (1 of 1) PF06741//PF07145//PF14438 - LsmAD domain (LsmAD) // Ataxin-2 C-terminal region (PAM2) // Ataxin 2 SM domain (SM-ATX) E. salsugineum v1.0 3599   scaffold_13: 4751742-4755340
Thhalv10011331m.g (1 of 1) PF06741//PF14438 - LsmAD domain (LsmAD) // Ataxin 2 SM domain (SM-ATX) E. salsugineum v1.0 3593   scaffold_7: 697759-701351
Ciclev10025086m.g (1 of 1) KOG2375 - Protein interacting with poly(A)-binding protein C. clementina v1.0 6154   scaffold_7: 6889270-6895423
Gorai.012G011100 (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein G. raimondii v2.1 8944   Chr12: 1235856-1244799
Gorai.010G234100 (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein G. raimondii v2.1 8851   Chr10: 60472280-60481130
Thecc1EG029104 (1 of 1) KOG2375 - Protein interacting with poly(A)-binding protein T. cacao v1.1 8793   scaffold_6: 20658692-20667484
Araha.12995s0002 (1 of 3) PTHR12854 - ATAXIN 2-RELATED A. halleri v1.1 5051   Scaffold12995: 11060-16110
Araha.21506s0004 (1 of 3) PTHR12854 - ATAXIN 2-RELATED A. halleri v1.1 4426   Scaffold21506: 13470-17895
Cagra.0736s0040 (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein C. grandiflora v1.1 4537   Scaffold736: 174899-179435
Cagra.20869s0001 (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein C. grandiflora v1.1 4595   Scaffold20869: 1332-5926
Brara.A03217 (1 of 6) PTHR12854 - ATAXIN 2-RELATED B. rapa FPsc v1.3 4534   A01: 26885000-26889533
Brara.E01517 (1 of 6) PTHR12854 - ATAXIN 2-RELATED B. rapa FPsc v1.3 3894   A05: 9908615-9912508
Brara.F00065 (1 of 6) PTHR12854 - ATAXIN 2-RELATED B. rapa FPsc v1.3 4155   A06: 504505-508659
Bostr.28625s0303 (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein B. stricta v1.2 4943   Scaffold28625: 1603413-1608355
Bostr.7128s0064 (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein B. stricta v1.2 5048   Scaffold7128: 404750-409797
AL1G62890 (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein A. lyrata v2.1 5051   scaffold_1: 28982909-28987959
AL3G26210 (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein A. lyrata v2.1 4701   scaffold_3: 5788291-5792991
Carub.0001s4341 (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein C. rubella v1.1 4807   scaffold_1: 19034829-19039635
Carub.0003s1359 (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein C. rubella v1.1 4572   scaffold_3: 4746551-4751122

22 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g045896m C. sinensis v1.1 124350030 CTC-interacting domain 4 1 5266 SBM
Cagra.20869s0001.1.p C. grandiflora v1.1 124350030 CTC-interacting domain 4 2 5266 SBM
Cagra.0736s0040.1.p C. grandiflora v1.1 124350030 CTC-interacting domain 4 2 5266 SBM
Bostr.7128s0064.1.p B. stricta v1.2 124350030 CTC-interacting domain 4 2 5266 SBM
Bostr.28625s0303.1.p B. stricta v1.2 124350030 CTC-interacting domain 4 2 5266 SBM
Carub.0001s4341.1.p C. rubella v1.1 124350030 CTC-interacting domain 4 2 5266 SBM
Carub.0003s1359.1.p C. rubella v1.1 124350030 CTC-interacting domain 4 2 5266 SBM
AT1G54170.1 A. thaliana TAIR10 124350030 CTC-interacting domain 4 2 5266 SBM
AT3G14010.1 A. thaliana TAIR10 124350030 CTC-interacting domain 4 2 5266 SBM
Thhalv10020519m E. salsugineum v1.0 124350030 CTC-interacting domain 4 2 5266 SBM
Thhalv10011331m E. salsugineum v1.0 124350030 CTC-interacting domain 4 2 5266 SBM
Ciclev10025086m C. clementina v1.0 124350030 CTC-interacting domain 4 1 5266 SBM
Gorai.012G011100.1 G. raimondii v2.1 124350030 CTC-interacting domain 4 2 5266 SBM
Gorai.010G234100.1 G. raimondii v2.1 124350030 CTC-interacting domain 4 2 5266 SBM
Thecc1EG029104t3 T. cacao v1.1 124350030 CTC-interacting domain 4 1 5266 SBM
Araha.12995s0002.1.p A. halleri v1.1 124350030 CTC-interacting domain 4 2 5266 SBM
Araha.21506s0004.1.p A. halleri v1.1 124350030 CTC-interacting domain 4 2 5266 SBM
Brara.F00065.1.p B. rapa FPsc v1.3 124350030 CTC-interacting domain 4 3 5266 SBM
Brara.E01517.1.p B. rapa FPsc v1.3 124350030 CTC-interacting domain 4 3 5266 SBM
Brara.A03217.1.p B. rapa FPsc v1.3 124350030 CTC-interacting domain 4 3 5266 SBM
AL3G26210.t1 A. lyrata v2.1 124350030 CTC-interacting domain 4 2 5266 SBM
AL1G62890.t1 A. lyrata v2.1 124350030 CTC-interacting domain 4 2 5266 SBM