Gene : Bostr.28625s0303 B. stricta v1.2

Defline:  (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein Genomic Order:  303
Name:  ? Bostr.28625s0303 Secondary Identifier:  ? PAC:30679428

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.28625s0303 0.5kb upstream 0.5kb upstream 5443 true Scaffold28625: 1603413-1608855 Boechera stricta
Bostr.28625s0303 0.5kb upstream 0.5kb upstream 500 false Scaffold28625: 1608356-1608855 Boechera stricta
Bostr.28625s0303 0.5kb downstream 0.5kb downstream 5443 true Scaffold28625: 1602913-1608355 Boechera stricta
Bostr.28625s0303 0.5kb downstream 0.5kb downstream 500 false Scaffold28625: 1602913-1603412 Boechera stricta
Bostr.28625s0303 1.0kb upstream 1.0kb upstream 5943 true Scaffold28625: 1603413-1609355 Boechera stricta
Bostr.28625s0303 1.0kb upstream 1.0kb upstream 1000 false Scaffold28625: 1608356-1609355 Boechera stricta
Bostr.28625s0303 1.0kb downstream 1.0kb downstream 5943 true Scaffold28625: 1602413-1608355 Boechera stricta
Bostr.28625s0303 1.0kb downstream 1.0kb downstream 1000 false Scaffold28625: 1602413-1603412 Boechera stricta
Bostr.28625s0303 2.0kb upstream 2.0kb upstream 6943 true Scaffold28625: 1603413-1610355 Boechera stricta
Bostr.28625s0303 2.0kb upstream 2.0kb upstream 2000 false Scaffold28625: 1608356-1610355 Boechera stricta
Bostr.28625s0303 2.0kb downstream 2.0kb downstream 6943 true Scaffold28625: 1601413-1608355 Boechera stricta
Bostr.28625s0303 2.0kb downstream 2.0kb downstream 2000 false Scaffold28625: 1601413-1603412 Boechera stricta
Bostr.28625s0303 5.0kb upstream 5.0kb upstream 9943 true Scaffold28625: 1603413-1613355 Boechera stricta
Bostr.28625s0303 5.0kb upstream 5.0kb upstream 5000 false Scaffold28625: 1608356-1613355 Boechera stricta
Bostr.28625s0303 5.0kb downstream 5.0kb downstream 9943 true Scaffold28625: 1598413-1608355 Boechera stricta
Bostr.28625s0303 5.0kb downstream 5.0kb downstream 5000 false Scaffold28625: 1598413-1603412 Boechera stricta
Bostr.28625s0303 10.0kb upstream 10.0kb upstream 14943 true Scaffold28625: 1603413-1618355 Boechera stricta
Bostr.28625s0303 10.0kb upstream 10.0kb upstream 10000 false Scaffold28625: 1608356-1618355 Boechera stricta
Bostr.28625s0303 10.0kb downstream 10.0kb downstream 14943 true Scaffold28625: 1593413-1608355 Boechera stricta
Bostr.28625s0303 10.0kb downstream 10.0kb downstream 10000 false Scaffold28625: 1593413-1603412 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375250 5261 Brassicaceae View MSA
123836951 5264 Brassicales-Malvales View MSA
124350030 5266 SBM View MSA
124239870 5268 Malvidae View MSA
124063578 5270 Rosid View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain