Gene : Cagra.20869s0001 C. grandiflora v1.1
Defline:  (1 of 2) KOG2375 - Protein interacting with poly(A)-binding protein Genomic Order:  1
Name:  ? Cagra.20869s0001 Secondary Identifier:  ? PAC:28893515
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20869s0001 0.5kb upstream 0.5kb upstream 5095 true Scaffold20869: 832-5926 Capsella grandiflora
Cagra.20869s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold20869: 832-1331 Capsella grandiflora
Cagra.20869s0001 0.5kb downstream 0.5kb downstream 5095 true Scaffold20869: 1332-6426 Capsella grandiflora
Cagra.20869s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold20869: 5927-6426 Capsella grandiflora
Cagra.20869s0001 1.0kb upstream 1.0kb upstream 5595 true Scaffold20869: 332-5926 Capsella grandiflora
Cagra.20869s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold20869: 332-1331 Capsella grandiflora
Cagra.20869s0001 1.0kb downstream 1.0kb downstream 5595 true Scaffold20869: 1332-6926 Capsella grandiflora
Cagra.20869s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold20869: 5927-6926 Capsella grandiflora
Cagra.20869s0001 2.0kb upstream 2.0kb upstream 5926 true Scaffold20869: 1-5926 Capsella grandiflora
Cagra.20869s0001 2.0kb upstream 2.0kb upstream 1331 false Scaffold20869: 1-1331 Capsella grandiflora
Cagra.20869s0001 2.0kb downstream 2.0kb downstream 6595 true Scaffold20869: 1332-7926 Capsella grandiflora
Cagra.20869s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold20869: 5927-7926 Capsella grandiflora
Cagra.20869s0001 5.0kb upstream 5.0kb upstream 5926 true Scaffold20869: 1-5926 Capsella grandiflora
Cagra.20869s0001 5.0kb upstream 5.0kb upstream 1331 false Scaffold20869: 1-1331 Capsella grandiflora
Cagra.20869s0001 5.0kb downstream 5.0kb downstream 9595 true Scaffold20869: 1332-10926 Capsella grandiflora
Cagra.20869s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold20869: 5927-10926 Capsella grandiflora
Cagra.20869s0001 10.0kb upstream 10.0kb upstream 5926 true Scaffold20869: 1-5926 Capsella grandiflora
Cagra.20869s0001 10.0kb upstream 10.0kb upstream 1331 false Scaffold20869: 1-1331 Capsella grandiflora
Cagra.20869s0001 10.0kb downstream 10.0kb downstream 14595 true Scaffold20869: 1332-15926 Capsella grandiflora
Cagra.20869s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold20869: 5927-15926 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370253 5261 Brassicaceae View MSA
123836951 5264 Brassicales-Malvales View MSA
124350030 5266 SBM View MSA
124239870 5268 Malvidae View MSA
124063578 5270 Rosid View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain