Gene : Brara.E01517 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR12854 - ATAXIN 2-RELATED Genomic Order:  1517
Name:  ? Brara.E01517 Secondary Identifier:  ? PAC:30623811
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01517 0.5kb upstream 0.5kb upstream 4394 true A05: 9908115-9912508 Brassica rapa FPsc
Brara.E01517 0.5kb upstream 0.5kb upstream 500 false A05: 9908115-9908614 Brassica rapa FPsc
Brara.E01517 0.5kb downstream 0.5kb downstream 4394 true A05: 9908615-9913008 Brassica rapa FPsc
Brara.E01517 0.5kb downstream 0.5kb downstream 500 false A05: 9912509-9913008 Brassica rapa FPsc
Brara.E01517 1.0kb upstream 1.0kb upstream 4894 true A05: 9907615-9912508 Brassica rapa FPsc
Brara.E01517 1.0kb upstream 1.0kb upstream 1000 false A05: 9907615-9908614 Brassica rapa FPsc
Brara.E01517 1.0kb downstream 1.0kb downstream 4894 true A05: 9908615-9913508 Brassica rapa FPsc
Brara.E01517 1.0kb downstream 1.0kb downstream 1000 false A05: 9912509-9913508 Brassica rapa FPsc
Brara.E01517 2.0kb upstream 2.0kb upstream 5894 true A05: 9906615-9912508 Brassica rapa FPsc
Brara.E01517 2.0kb upstream 2.0kb upstream 2000 false A05: 9906615-9908614 Brassica rapa FPsc
Brara.E01517 2.0kb downstream 2.0kb downstream 5894 true A05: 9908615-9914508 Brassica rapa FPsc
Brara.E01517 2.0kb downstream 2.0kb downstream 2000 false A05: 9912509-9914508 Brassica rapa FPsc
Brara.E01517 5.0kb upstream 5.0kb upstream 8894 true A05: 9903615-9912508 Brassica rapa FPsc
Brara.E01517 5.0kb upstream 5.0kb upstream 5000 false A05: 9903615-9908614 Brassica rapa FPsc
Brara.E01517 5.0kb downstream 5.0kb downstream 8894 true A05: 9908615-9917508 Brassica rapa FPsc
Brara.E01517 5.0kb downstream 5.0kb downstream 5000 false A05: 9912509-9917508 Brassica rapa FPsc
Brara.E01517 10.0kb upstream 10.0kb upstream 13894 true A05: 9898615-9912508 Brassica rapa FPsc
Brara.E01517 10.0kb upstream 10.0kb upstream 10000 false A05: 9898615-9908614 Brassica rapa FPsc
Brara.E01517 10.0kb downstream 10.0kb downstream 13894 true A05: 9908615-9922508 Brassica rapa FPsc
Brara.E01517 10.0kb downstream 10.0kb downstream 10000 false A05: 9912509-9922508 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349201 5261 Brassicaceae Singleton cluster - no MSA
123788426 5264 Brassicales-Malvales Singleton cluster - no MSA
124350030 5266 SBM View MSA
124239870 5268 Malvidae View MSA
124063578 5270 Rosid View MSA
123743281 5271 Pentapetalae View MSA
122790252 5272 Eudicot View MSA
122049882 5273 Angiosperm View MSA
121348132 5274 Embryophyte View MSA
123427801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier