Gene : Cagra.0716s0085 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31867:SF5 - EXPANSIN-A16-RELATED Genomic Order:  85
Name:  ? Cagra.0716s0085 Secondary Identifier:  ? PAC:28895643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0716s0085 0.5kb upstream 0.5kb upstream 2208 true Scaffold716: 333397-335604 Capsella grandiflora
Cagra.0716s0085 0.5kb upstream 0.5kb upstream 500 false Scaffold716: 335105-335604 Capsella grandiflora
Cagra.0716s0085 0.5kb downstream 0.5kb downstream 2208 true Scaffold716: 332897-335104 Capsella grandiflora
Cagra.0716s0085 0.5kb downstream 0.5kb downstream 500 false Scaffold716: 332897-333396 Capsella grandiflora
Cagra.0716s0085 1.0kb upstream 1.0kb upstream 2708 true Scaffold716: 333397-336104 Capsella grandiflora
Cagra.0716s0085 1.0kb upstream 1.0kb upstream 1000 false Scaffold716: 335105-336104 Capsella grandiflora
Cagra.0716s0085 1.0kb downstream 1.0kb downstream 2708 true Scaffold716: 332397-335104 Capsella grandiflora
Cagra.0716s0085 1.0kb downstream 1.0kb downstream 1000 false Scaffold716: 332397-333396 Capsella grandiflora
Cagra.0716s0085 2.0kb upstream 2.0kb upstream 3708 true Scaffold716: 333397-337104 Capsella grandiflora
Cagra.0716s0085 2.0kb upstream 2.0kb upstream 2000 false Scaffold716: 335105-337104 Capsella grandiflora
Cagra.0716s0085 2.0kb downstream 2.0kb downstream 3708 true Scaffold716: 331397-335104 Capsella grandiflora
Cagra.0716s0085 2.0kb downstream 2.0kb downstream 2000 false Scaffold716: 331397-333396 Capsella grandiflora
Cagra.0716s0085 5.0kb upstream 5.0kb upstream 6708 true Scaffold716: 333397-340104 Capsella grandiflora
Cagra.0716s0085 5.0kb upstream 5.0kb upstream 5000 false Scaffold716: 335105-340104 Capsella grandiflora
Cagra.0716s0085 5.0kb downstream 5.0kb downstream 6708 true Scaffold716: 328397-335104 Capsella grandiflora
Cagra.0716s0085 5.0kb downstream 5.0kb downstream 5000 false Scaffold716: 328397-333396 Capsella grandiflora
Cagra.0716s0085 10.0kb upstream 10.0kb upstream 11708 true Scaffold716: 333397-345104 Capsella grandiflora
Cagra.0716s0085 10.0kb upstream 10.0kb upstream 10000 false Scaffold716: 335105-345104 Capsella grandiflora
Cagra.0716s0085 10.0kb downstream 10.0kb downstream 11708 true Scaffold716: 323397-335104 Capsella grandiflora
Cagra.0716s0085 10.0kb downstream 10.0kb downstream 10000 false Scaffold716: 323397-333396 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351028 5266 SBM View MSA
122362760 5261 Brassicaceae View MSA
123839311 5264 Brassicales-Malvales View MSA
124249607 5268 Malvidae View MSA
124071064 5270 Rosid View MSA
123750763 5271 Pentapetalae View MSA
122796391 5272 Eudicot View MSA
122047888 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain