Gene : Cagra.0712s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12195 - P53 INDUCIBLE PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.0712s0004 Secondary Identifier:  ? PAC:28899924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0712s0004 0.5kb upstream 0.5kb upstream 8166 true Scaffold712: 5279-13444 Capsella grandiflora
Cagra.0712s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold712: 12945-13444 Capsella grandiflora
Cagra.0712s0004 0.5kb downstream 0.5kb downstream 8166 true Scaffold712: 4779-12944 Capsella grandiflora
Cagra.0712s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold712: 4779-5278 Capsella grandiflora
Cagra.0712s0004 1.0kb upstream 1.0kb upstream 8666 true Scaffold712: 5279-13944 Capsella grandiflora
Cagra.0712s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold712: 12945-13944 Capsella grandiflora
Cagra.0712s0004 1.0kb downstream 1.0kb downstream 8666 true Scaffold712: 4279-12944 Capsella grandiflora
Cagra.0712s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold712: 4279-5278 Capsella grandiflora
Cagra.0712s0004 2.0kb upstream 2.0kb upstream 9666 true Scaffold712: 5279-14944 Capsella grandiflora
Cagra.0712s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold712: 12945-14944 Capsella grandiflora
Cagra.0712s0004 2.0kb downstream 2.0kb downstream 9666 true Scaffold712: 3279-12944 Capsella grandiflora
Cagra.0712s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold712: 3279-5278 Capsella grandiflora
Cagra.0712s0004 5.0kb upstream 5.0kb upstream 12666 true Scaffold712: 5279-17944 Capsella grandiflora
Cagra.0712s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold712: 12945-17944 Capsella grandiflora
Cagra.0712s0004 5.0kb downstream 5.0kb downstream 12666 true Scaffold712: 279-12944 Capsella grandiflora
Cagra.0712s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold712: 279-5278 Capsella grandiflora
Cagra.0712s0004 10.0kb upstream 10.0kb upstream 17666 true Scaffold712: 5279-22944 Capsella grandiflora
Cagra.0712s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold712: 12945-22944 Capsella grandiflora
Cagra.0712s0004 10.0kb downstream 10.0kb downstream 12944 true Scaffold712: 1-12944 Capsella grandiflora
Cagra.0712s0004 10.0kb downstream 10.0kb downstream 5278 false Scaffold712: 1-5278 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047332 5273 Angiosperm View MSA
122369882 5261 Brassicaceae View MSA
123829275 5264 Brassicales-Malvales View MSA
124342049 5266 SBM View MSA
124242116 5268 Malvidae View MSA
124065928 5270 Rosid View MSA
123737090 5271 Pentapetalae View MSA
122792740 5272 Eudicot View MSA
121351207 5274 Embryophyte View MSA
123426816 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain