Gene : Cagra.0712s0021 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11953:SF0 - EXOSOME COMPLEX COMPONENT RRP41 Genomic Order:  21
Name:  ? Cagra.0712s0021 Secondary Identifier:  ? PAC:28899908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0712s0021 0.5kb upstream 0.5kb upstream 2110 true Scaffold712: 71156-73265 Capsella grandiflora
Cagra.0712s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold712: 71156-71655 Capsella grandiflora
Cagra.0712s0021 0.5kb downstream 0.5kb downstream 2110 true Scaffold712: 71656-73765 Capsella grandiflora
Cagra.0712s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold712: 73266-73765 Capsella grandiflora
Cagra.0712s0021 1.0kb upstream 1.0kb upstream 2610 true Scaffold712: 70656-73265 Capsella grandiflora
Cagra.0712s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold712: 70656-71655 Capsella grandiflora
Cagra.0712s0021 1.0kb downstream 1.0kb downstream 2610 true Scaffold712: 71656-74265 Capsella grandiflora
Cagra.0712s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold712: 73266-74265 Capsella grandiflora
Cagra.0712s0021 2.0kb upstream 2.0kb upstream 3610 true Scaffold712: 69656-73265 Capsella grandiflora
Cagra.0712s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold712: 69656-71655 Capsella grandiflora
Cagra.0712s0021 2.0kb downstream 2.0kb downstream 3610 true Scaffold712: 71656-75265 Capsella grandiflora
Cagra.0712s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold712: 73266-75265 Capsella grandiflora
Cagra.0712s0021 5.0kb upstream 5.0kb upstream 6610 true Scaffold712: 66656-73265 Capsella grandiflora
Cagra.0712s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold712: 66656-71655 Capsella grandiflora
Cagra.0712s0021 5.0kb downstream 5.0kb downstream 6610 true Scaffold712: 71656-78265 Capsella grandiflora
Cagra.0712s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold712: 73266-78265 Capsella grandiflora
Cagra.0712s0021 10.0kb upstream 10.0kb upstream 11610 true Scaffold712: 61656-73265 Capsella grandiflora
Cagra.0712s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold712: 61656-71655 Capsella grandiflora
Cagra.0712s0021 10.0kb downstream 10.0kb downstream 11610 true Scaffold712: 71656-83265 Capsella grandiflora
Cagra.0712s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold712: 73266-83265 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371576 5261 Brassicaceae View MSA
123834938 5264 Brassicales-Malvales View MSA
124344691 5266 SBM View MSA
124243577 5268 Malvidae View MSA
124062845 5270 Rosid View MSA
123742104 5271 Pentapetalae View MSA
122787279 5272 Eudicot View MSA
122045515 5273 Angiosperm View MSA
121344104 5274 Embryophyte View MSA
123423845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain