Gene : Cagra.0716s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24349:SF81 - CALCIUM-DEPENDENT PROTEIN KINASE 20 Genomic Order:  9
Name:  ? Cagra.0716s0009 Secondary Identifier:  ? PAC:28895701
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0716s0009 0.5kb upstream 0.5kb upstream 2900 true Scaffold716: 20890-23789 Capsella grandiflora
Cagra.0716s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold716: 23290-23789 Capsella grandiflora
Cagra.0716s0009 0.5kb downstream 0.5kb downstream 2900 true Scaffold716: 20390-23289 Capsella grandiflora
Cagra.0716s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold716: 20390-20889 Capsella grandiflora
Cagra.0716s0009 1.0kb upstream 1.0kb upstream 3400 true Scaffold716: 20890-24289 Capsella grandiflora
Cagra.0716s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold716: 23290-24289 Capsella grandiflora
Cagra.0716s0009 1.0kb downstream 1.0kb downstream 3400 true Scaffold716: 19890-23289 Capsella grandiflora
Cagra.0716s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold716: 19890-20889 Capsella grandiflora
Cagra.0716s0009 2.0kb upstream 2.0kb upstream 4400 true Scaffold716: 20890-25289 Capsella grandiflora
Cagra.0716s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold716: 23290-25289 Capsella grandiflora
Cagra.0716s0009 2.0kb downstream 2.0kb downstream 4400 true Scaffold716: 18890-23289 Capsella grandiflora
Cagra.0716s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold716: 18890-20889 Capsella grandiflora
Cagra.0716s0009 5.0kb upstream 5.0kb upstream 7400 true Scaffold716: 20890-28289 Capsella grandiflora
Cagra.0716s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold716: 23290-28289 Capsella grandiflora
Cagra.0716s0009 5.0kb downstream 5.0kb downstream 7400 true Scaffold716: 15890-23289 Capsella grandiflora
Cagra.0716s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold716: 15890-20889 Capsella grandiflora
Cagra.0716s0009 10.0kb upstream 10.0kb upstream 12400 true Scaffold716: 20890-33289 Capsella grandiflora
Cagra.0716s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold716: 23290-33289 Capsella grandiflora
Cagra.0716s0009 10.0kb downstream 10.0kb downstream 12400 true Scaffold716: 10890-23289 Capsella grandiflora
Cagra.0716s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold716: 10890-20889 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370911 5261 Brassicaceae View MSA
123834967 5264 Brassicales-Malvales View MSA
124346326 5266 SBM View MSA
124238266 5268 Malvidae View MSA
124067641 5270 Rosid View MSA
123746837 5271 Pentapetalae View MSA
122788348 5272 Eudicot View MSA
122047309 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain