Gene : Cagra.0716s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10694//PTHR10694:SF54 - JUMONJI DOMAIN CONTAINING PROTEIN Genomic Order:  12
Name:  ? Cagra.0716s0012 Secondary Identifier:  ? PAC:28895662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0716s0012 0.5kb upstream 0.5kb upstream 4665 true Scaffold716: 37699-42363 Capsella grandiflora
Cagra.0716s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold716: 37699-38198 Capsella grandiflora
Cagra.0716s0012 0.5kb downstream 0.5kb downstream 4665 true Scaffold716: 38199-42863 Capsella grandiflora
Cagra.0716s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold716: 42364-42863 Capsella grandiflora
Cagra.0716s0012 1.0kb upstream 1.0kb upstream 5165 true Scaffold716: 37199-42363 Capsella grandiflora
Cagra.0716s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold716: 37199-38198 Capsella grandiflora
Cagra.0716s0012 1.0kb downstream 1.0kb downstream 5165 true Scaffold716: 38199-43363 Capsella grandiflora
Cagra.0716s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold716: 42364-43363 Capsella grandiflora
Cagra.0716s0012 2.0kb upstream 2.0kb upstream 6165 true Scaffold716: 36199-42363 Capsella grandiflora
Cagra.0716s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold716: 36199-38198 Capsella grandiflora
Cagra.0716s0012 2.0kb downstream 2.0kb downstream 6165 true Scaffold716: 38199-44363 Capsella grandiflora
Cagra.0716s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold716: 42364-44363 Capsella grandiflora
Cagra.0716s0012 5.0kb upstream 5.0kb upstream 9165 true Scaffold716: 33199-42363 Capsella grandiflora
Cagra.0716s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold716: 33199-38198 Capsella grandiflora
Cagra.0716s0012 5.0kb downstream 5.0kb downstream 9165 true Scaffold716: 38199-47363 Capsella grandiflora
Cagra.0716s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold716: 42364-47363 Capsella grandiflora
Cagra.0716s0012 10.0kb upstream 10.0kb upstream 14165 true Scaffold716: 28199-42363 Capsella grandiflora
Cagra.0716s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold716: 28199-38198 Capsella grandiflora
Cagra.0716s0012 10.0kb downstream 10.0kb downstream 14165 true Scaffold716: 38199-52363 Capsella grandiflora
Cagra.0716s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold716: 42364-52363 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362963 5261 Brassicaceae View MSA
123832649 5264 Brassicales-Malvales View MSA
124348999 5266 SBM View MSA
124244079 5268 Malvidae View MSA
124069719 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain