Gene : Cagra.0691s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10073:SF40 - DNA MISMATCH REPAIR PROTEIN MLH1 Genomic Order:  6
Name:  ? Cagra.0691s0006 Secondary Identifier:  ? PAC:28915097
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0691s0006 0.5kb upstream 0.5kb upstream 4637 true Scaffold691: 21113-25749 Capsella grandiflora
Cagra.0691s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold691: 21113-21612 Capsella grandiflora
Cagra.0691s0006 0.5kb downstream 0.5kb downstream 4637 true Scaffold691: 21613-26249 Capsella grandiflora
Cagra.0691s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold691: 25750-26249 Capsella grandiflora
Cagra.0691s0006 1.0kb upstream 1.0kb upstream 5137 true Scaffold691: 20613-25749 Capsella grandiflora
Cagra.0691s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold691: 20613-21612 Capsella grandiflora
Cagra.0691s0006 1.0kb downstream 1.0kb downstream 5137 true Scaffold691: 21613-26749 Capsella grandiflora
Cagra.0691s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold691: 25750-26749 Capsella grandiflora
Cagra.0691s0006 2.0kb upstream 2.0kb upstream 6137 true Scaffold691: 19613-25749 Capsella grandiflora
Cagra.0691s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold691: 19613-21612 Capsella grandiflora
Cagra.0691s0006 2.0kb downstream 2.0kb downstream 6137 true Scaffold691: 21613-27749 Capsella grandiflora
Cagra.0691s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold691: 25750-27749 Capsella grandiflora
Cagra.0691s0006 5.0kb upstream 5.0kb upstream 9137 true Scaffold691: 16613-25749 Capsella grandiflora
Cagra.0691s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold691: 16613-21612 Capsella grandiflora
Cagra.0691s0006 5.0kb downstream 5.0kb downstream 7191 true Scaffold691: 21613-28803 Capsella grandiflora
Cagra.0691s0006 5.0kb downstream 5.0kb downstream 3054 false Scaffold691: 25750-28803 Capsella grandiflora
Cagra.0691s0006 10.0kb upstream 10.0kb upstream 14137 true Scaffold691: 11613-25749 Capsella grandiflora
Cagra.0691s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold691: 11613-21612 Capsella grandiflora
Cagra.0691s0006 10.0kb downstream 10.0kb downstream 7191 true Scaffold691: 21613-28803 Capsella grandiflora
Cagra.0691s0006 10.0kb downstream 10.0kb downstream 3054 false Scaffold691: 25750-28803 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374886 5261 Brassicaceae View MSA
123832351 5264 Brassicales-Malvales View MSA
124340120 5266 SBM View MSA
124240486 5268 Malvidae View MSA
124050491 5270 Rosid View MSA
123746957 5271 Pentapetalae View MSA
122790973 5272 Eudicot View MSA
122045945 5273 Angiosperm View MSA
121345216 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain