Gene : Cagra.0698s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33601:SF1 - LITTLE ZIPPER 1 PROTEIN-RELATED Genomic Order:  18
Name:  ? Cagra.0698s0018 Secondary Identifier:  ? PAC:28896240
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0698s0018 0.5kb upstream 0.5kb upstream 1390 true Scaffold698: 64792-66181 Capsella grandiflora
Cagra.0698s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold698: 64792-65291 Capsella grandiflora
Cagra.0698s0018 0.5kb downstream 0.5kb downstream 1390 true Scaffold698: 65292-66681 Capsella grandiflora
Cagra.0698s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold698: 66182-66681 Capsella grandiflora
Cagra.0698s0018 1.0kb upstream 1.0kb upstream 1890 true Scaffold698: 64292-66181 Capsella grandiflora
Cagra.0698s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold698: 64292-65291 Capsella grandiflora
Cagra.0698s0018 1.0kb downstream 1.0kb downstream 1890 true Scaffold698: 65292-67181 Capsella grandiflora
Cagra.0698s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold698: 66182-67181 Capsella grandiflora
Cagra.0698s0018 2.0kb upstream 2.0kb upstream 2890 true Scaffold698: 63292-66181 Capsella grandiflora
Cagra.0698s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold698: 63292-65291 Capsella grandiflora
Cagra.0698s0018 2.0kb downstream 2.0kb downstream 2890 true Scaffold698: 65292-68181 Capsella grandiflora
Cagra.0698s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold698: 66182-68181 Capsella grandiflora
Cagra.0698s0018 5.0kb upstream 5.0kb upstream 5890 true Scaffold698: 60292-66181 Capsella grandiflora
Cagra.0698s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold698: 60292-65291 Capsella grandiflora
Cagra.0698s0018 5.0kb downstream 5.0kb downstream 5890 true Scaffold698: 65292-71181 Capsella grandiflora
Cagra.0698s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold698: 66182-71181 Capsella grandiflora
Cagra.0698s0018 10.0kb upstream 10.0kb upstream 10890 true Scaffold698: 55292-66181 Capsella grandiflora
Cagra.0698s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold698: 55292-65291 Capsella grandiflora
Cagra.0698s0018 10.0kb downstream 10.0kb downstream 10890 true Scaffold698: 65292-76181 Capsella grandiflora
Cagra.0698s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold698: 66182-76181 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041483 5273 Angiosperm View MSA
122367852 5261 Brassicaceae View MSA
123841366 5264 Brassicales-Malvales View MSA
124347550 5266 SBM View MSA
124250635 5268 Malvidae View MSA
124070399 5270 Rosid View MSA
123743735 5271 Pentapetalae View MSA
122787347 5272 Eudicot View MSA
121309855 5274 Embryophyte View MSA
123347500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain