Gene : Cagra.0684s0023 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10540:SF8 - COP9 SIGNALOSOME COMPLEX SUBUNIT 6 Genomic Order:  23
Name:  ? Cagra.0684s0023 Secondary Identifier:  ? PAC:28908085
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0684s0023 0.5kb upstream 0.5kb upstream 2809 true Scaffold684: 63997-66805 Capsella grandiflora
Cagra.0684s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold684: 66306-66805 Capsella grandiflora
Cagra.0684s0023 0.5kb downstream 0.5kb downstream 2809 true Scaffold684: 63497-66305 Capsella grandiflora
Cagra.0684s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold684: 63497-63996 Capsella grandiflora
Cagra.0684s0023 1.0kb upstream 1.0kb upstream 3309 true Scaffold684: 63997-67305 Capsella grandiflora
Cagra.0684s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold684: 66306-67305 Capsella grandiflora
Cagra.0684s0023 1.0kb downstream 1.0kb downstream 3309 true Scaffold684: 62997-66305 Capsella grandiflora
Cagra.0684s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold684: 62997-63996 Capsella grandiflora
Cagra.0684s0023 2.0kb upstream 2.0kb upstream 4309 true Scaffold684: 63997-68305 Capsella grandiflora
Cagra.0684s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold684: 66306-68305 Capsella grandiflora
Cagra.0684s0023 2.0kb downstream 2.0kb downstream 4309 true Scaffold684: 61997-66305 Capsella grandiflora
Cagra.0684s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold684: 61997-63996 Capsella grandiflora
Cagra.0684s0023 5.0kb upstream 5.0kb upstream 7309 true Scaffold684: 63997-71305 Capsella grandiflora
Cagra.0684s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold684: 66306-71305 Capsella grandiflora
Cagra.0684s0023 5.0kb downstream 5.0kb downstream 7309 true Scaffold684: 58997-66305 Capsella grandiflora
Cagra.0684s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold684: 58997-63996 Capsella grandiflora
Cagra.0684s0023 10.0kb upstream 10.0kb upstream 12309 true Scaffold684: 63997-76305 Capsella grandiflora
Cagra.0684s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold684: 66306-76305 Capsella grandiflora
Cagra.0684s0023 10.0kb downstream 10.0kb downstream 12309 true Scaffold684: 53997-66305 Capsella grandiflora
Cagra.0684s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold684: 53997-63996 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376361 5261 Brassicaceae View MSA
123801225 5264 Brassicales-Malvales View MSA
124298550 5266 SBM View MSA
124150169 5268 Malvidae View MSA
123875833 5270 Rosid View MSA
123746091 5271 Pentapetalae View MSA
122792490 5272 Eudicot View MSA
122050330 5273 Angiosperm View MSA
121345331 5274 Embryophyte View MSA
123424156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain