Gene : Cagra.0684s0034 C. grandiflora v1.1
Defline:  (1 of 1) PTHR30053:SF1 - ELONGATION FACTOR P (EF-P) FAMILY PROTEIN Genomic Order:  34
Name:  ? Cagra.0684s0034 Secondary Identifier:  ? PAC:28908086
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0684s0034 0.5kb upstream 0.5kb upstream 3161 true Scaffold684: 92377-95537 Capsella grandiflora
Cagra.0684s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold684: 92377-92876 Capsella grandiflora
Cagra.0684s0034 0.5kb downstream 0.5kb downstream 3161 true Scaffold684: 92877-96037 Capsella grandiflora
Cagra.0684s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold684: 95538-96037 Capsella grandiflora
Cagra.0684s0034 1.0kb upstream 1.0kb upstream 3661 true Scaffold684: 91877-95537 Capsella grandiflora
Cagra.0684s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold684: 91877-92876 Capsella grandiflora
Cagra.0684s0034 1.0kb downstream 1.0kb downstream 3661 true Scaffold684: 92877-96537 Capsella grandiflora
Cagra.0684s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold684: 95538-96537 Capsella grandiflora
Cagra.0684s0034 2.0kb upstream 2.0kb upstream 4661 true Scaffold684: 90877-95537 Capsella grandiflora
Cagra.0684s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold684: 90877-92876 Capsella grandiflora
Cagra.0684s0034 2.0kb downstream 2.0kb downstream 4661 true Scaffold684: 92877-97537 Capsella grandiflora
Cagra.0684s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold684: 95538-97537 Capsella grandiflora
Cagra.0684s0034 5.0kb upstream 5.0kb upstream 7661 true Scaffold684: 87877-95537 Capsella grandiflora
Cagra.0684s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold684: 87877-92876 Capsella grandiflora
Cagra.0684s0034 5.0kb downstream 5.0kb downstream 7661 true Scaffold684: 92877-100537 Capsella grandiflora
Cagra.0684s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold684: 95538-100537 Capsella grandiflora
Cagra.0684s0034 10.0kb upstream 10.0kb upstream 12661 true Scaffold684: 82877-95537 Capsella grandiflora
Cagra.0684s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold684: 82877-92876 Capsella grandiflora
Cagra.0684s0034 10.0kb downstream 10.0kb downstream 12661 true Scaffold684: 92877-105537 Capsella grandiflora
Cagra.0684s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold684: 95538-105537 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369402 5261 Brassicaceae View MSA
123834736 5264 Brassicales-Malvales View MSA
124337442 5266 SBM View MSA
124243083 5268 Malvidae View MSA
124063397 5270 Rosid View MSA
123744181 5271 Pentapetalae View MSA
122791327 5272 Eudicot View MSA
122051510 5273 Angiosperm View MSA
121347345 5274 Embryophyte View MSA
123424551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain