Gene : Cagra.0686s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF25 - OTU DOMAIN CONTAINING PROTEIN Genomic Order:  1
Name:  ? Cagra.0686s0001 Secondary Identifier:  ? PAC:28900995
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0001 0.5kb upstream 0.5kb upstream 2786 true Scaffold686: 801-3586 Capsella grandiflora
Cagra.0686s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 801-1300 Capsella grandiflora
Cagra.0686s0001 0.5kb downstream 0.5kb downstream 2786 true Scaffold686: 1301-4086 Capsella grandiflora
Cagra.0686s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 3587-4086 Capsella grandiflora
Cagra.0686s0001 1.0kb upstream 1.0kb upstream 3286 true Scaffold686: 301-3586 Capsella grandiflora
Cagra.0686s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 301-1300 Capsella grandiflora
Cagra.0686s0001 1.0kb downstream 1.0kb downstream 3286 true Scaffold686: 1301-4586 Capsella grandiflora
Cagra.0686s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 3587-4586 Capsella grandiflora
Cagra.0686s0001 2.0kb upstream 2.0kb upstream 3586 true Scaffold686: 1-3586 Capsella grandiflora
Cagra.0686s0001 2.0kb upstream 2.0kb upstream 1300 false Scaffold686: 1-1300 Capsella grandiflora
Cagra.0686s0001 2.0kb downstream 2.0kb downstream 4286 true Scaffold686: 1301-5586 Capsella grandiflora
Cagra.0686s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 3587-5586 Capsella grandiflora
Cagra.0686s0001 5.0kb upstream 5.0kb upstream 3586 true Scaffold686: 1-3586 Capsella grandiflora
Cagra.0686s0001 5.0kb upstream 5.0kb upstream 1300 false Scaffold686: 1-1300 Capsella grandiflora
Cagra.0686s0001 5.0kb downstream 5.0kb downstream 7286 true Scaffold686: 1301-8586 Capsella grandiflora
Cagra.0686s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 3587-8586 Capsella grandiflora
Cagra.0686s0001 10.0kb upstream 10.0kb upstream 3586 true Scaffold686: 1-3586 Capsella grandiflora
Cagra.0686s0001 10.0kb upstream 10.0kb upstream 1300 false Scaffold686: 1-1300 Capsella grandiflora
Cagra.0686s0001 10.0kb downstream 10.0kb downstream 12286 true Scaffold686: 1301-13586 Capsella grandiflora
Cagra.0686s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 3587-13586 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074941 5270 Rosid View MSA
122363214 5261 Brassicaceae View MSA
123829764 5264 Brassicales-Malvales View MSA
124337615 5266 SBM View MSA
124242975 5268 Malvidae View MSA
123749661 5271 Pentapetalae View MSA
122794711 5272 Eudicot View MSA
122048756 5273 Angiosperm View MSA
121349238 5274 Embryophyte View MSA
123428485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain