Gene : Cagra.0686s0036 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31529:SF2 - LOB DOMAIN-CONTAINING PROTEIN 17-RELATED Genomic Order:  36
Name:  ? Cagra.0686s0036 Secondary Identifier:  ? PAC:28900994
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0036 0.5kb upstream 0.5kb upstream 1312 true Scaffold686: 131656-132967 Capsella grandiflora
Cagra.0686s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 132468-132967 Capsella grandiflora
Cagra.0686s0036 0.5kb downstream 0.5kb downstream 1312 true Scaffold686: 131156-132467 Capsella grandiflora
Cagra.0686s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 131156-131655 Capsella grandiflora
Cagra.0686s0036 1.0kb upstream 1.0kb upstream 1812 true Scaffold686: 131656-133467 Capsella grandiflora
Cagra.0686s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 132468-133467 Capsella grandiflora
Cagra.0686s0036 1.0kb downstream 1.0kb downstream 1812 true Scaffold686: 130656-132467 Capsella grandiflora
Cagra.0686s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 130656-131655 Capsella grandiflora
Cagra.0686s0036 2.0kb upstream 2.0kb upstream 2812 true Scaffold686: 131656-134467 Capsella grandiflora
Cagra.0686s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold686: 132468-134467 Capsella grandiflora
Cagra.0686s0036 2.0kb downstream 2.0kb downstream 2812 true Scaffold686: 129656-132467 Capsella grandiflora
Cagra.0686s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 129656-131655 Capsella grandiflora
Cagra.0686s0036 5.0kb upstream 5.0kb upstream 5812 true Scaffold686: 131656-137467 Capsella grandiflora
Cagra.0686s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold686: 132468-137467 Capsella grandiflora
Cagra.0686s0036 5.0kb downstream 5.0kb downstream 5812 true Scaffold686: 126656-132467 Capsella grandiflora
Cagra.0686s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 126656-131655 Capsella grandiflora
Cagra.0686s0036 10.0kb upstream 10.0kb upstream 10812 true Scaffold686: 131656-142467 Capsella grandiflora
Cagra.0686s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold686: 132468-142467 Capsella grandiflora
Cagra.0686s0036 10.0kb downstream 10.0kb downstream 10812 true Scaffold686: 121656-132467 Capsella grandiflora
Cagra.0686s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 121656-131655 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029797 5273 Angiosperm View MSA
122365869 5261 Brassicaceae View MSA
123835967 5264 Brassicales-Malvales View MSA
124343312 5266 SBM View MSA
124240065 5268 Malvidae View MSA
124062010 5270 Rosid View MSA
123741408 5271 Pentapetalae View MSA
122794456 5272 Eudicot View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain