Gene : Cagra.0666s0028 C. grandiflora v1.1
Defline:  (1 of 3) PTHR19139:SF167 - AQUAPORIN PIP2-1-RELATED Genomic Order:  28
Name:  ? Cagra.0666s0028 Secondary Identifier:  ? PAC:28911334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0666s0028 0.5kb upstream 0.5kb upstream 1908 true Scaffold666: 106639-108546 Capsella grandiflora
Cagra.0666s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold666: 106639-107138 Capsella grandiflora
Cagra.0666s0028 0.5kb downstream 0.5kb downstream 1908 true Scaffold666: 107139-109046 Capsella grandiflora
Cagra.0666s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold666: 108547-109046 Capsella grandiflora
Cagra.0666s0028 1.0kb upstream 1.0kb upstream 2408 true Scaffold666: 106139-108546 Capsella grandiflora
Cagra.0666s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold666: 106139-107138 Capsella grandiflora
Cagra.0666s0028 1.0kb downstream 1.0kb downstream 2408 true Scaffold666: 107139-109546 Capsella grandiflora
Cagra.0666s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold666: 108547-109546 Capsella grandiflora
Cagra.0666s0028 2.0kb upstream 2.0kb upstream 3408 true Scaffold666: 105139-108546 Capsella grandiflora
Cagra.0666s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold666: 105139-107138 Capsella grandiflora
Cagra.0666s0028 2.0kb downstream 2.0kb downstream 3408 true Scaffold666: 107139-110546 Capsella grandiflora
Cagra.0666s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold666: 108547-110546 Capsella grandiflora
Cagra.0666s0028 5.0kb upstream 5.0kb upstream 6408 true Scaffold666: 102139-108546 Capsella grandiflora
Cagra.0666s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold666: 102139-107138 Capsella grandiflora
Cagra.0666s0028 5.0kb downstream 5.0kb downstream 6408 true Scaffold666: 107139-113546 Capsella grandiflora
Cagra.0666s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold666: 108547-113546 Capsella grandiflora
Cagra.0666s0028 10.0kb upstream 10.0kb upstream 11408 true Scaffold666: 97139-108546 Capsella grandiflora
Cagra.0666s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold666: 97139-107138 Capsella grandiflora
Cagra.0666s0028 10.0kb downstream 10.0kb downstream 11408 true Scaffold666: 107139-118546 Capsella grandiflora
Cagra.0666s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold666: 108547-118546 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381491 5261 Brassicaceae View MSA
123841120 5264 Brassicales-Malvales View MSA
124348415 5266 SBM View MSA
124250683 5268 Malvidae View MSA
124072512 5270 Rosid View MSA
123751650 5271 Pentapetalae View MSA
122791496 5272 Eudicot View MSA
122046313 5273 Angiosperm View MSA
121349621 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain