Gene : Cagra.0666s0039 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Genomic Order:  39
Name:  ? Cagra.0666s0039 Secondary Identifier:  ? PAC:28911311
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0666s0039 0.5kb upstream 0.5kb upstream 2781 true Scaffold666: 146876-149656 Capsella grandiflora
Cagra.0666s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold666: 149157-149656 Capsella grandiflora
Cagra.0666s0039 0.5kb downstream 0.5kb downstream 2781 true Scaffold666: 146376-149156 Capsella grandiflora
Cagra.0666s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold666: 146376-146875 Capsella grandiflora
Cagra.0666s0039 1.0kb upstream 1.0kb upstream 3281 true Scaffold666: 146876-150156 Capsella grandiflora
Cagra.0666s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold666: 149157-150156 Capsella grandiflora
Cagra.0666s0039 1.0kb downstream 1.0kb downstream 3281 true Scaffold666: 145876-149156 Capsella grandiflora
Cagra.0666s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold666: 145876-146875 Capsella grandiflora
Cagra.0666s0039 2.0kb upstream 2.0kb upstream 4281 true Scaffold666: 146876-151156 Capsella grandiflora
Cagra.0666s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold666: 149157-151156 Capsella grandiflora
Cagra.0666s0039 2.0kb downstream 2.0kb downstream 4281 true Scaffold666: 144876-149156 Capsella grandiflora
Cagra.0666s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold666: 144876-146875 Capsella grandiflora
Cagra.0666s0039 5.0kb upstream 5.0kb upstream 7281 true Scaffold666: 146876-154156 Capsella grandiflora
Cagra.0666s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold666: 149157-154156 Capsella grandiflora
Cagra.0666s0039 5.0kb downstream 5.0kb downstream 7281 true Scaffold666: 141876-149156 Capsella grandiflora
Cagra.0666s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold666: 141876-146875 Capsella grandiflora
Cagra.0666s0039 10.0kb upstream 10.0kb upstream 12281 true Scaffold666: 146876-159156 Capsella grandiflora
Cagra.0666s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold666: 149157-159156 Capsella grandiflora
Cagra.0666s0039 10.0kb downstream 10.0kb downstream 12281 true Scaffold666: 136876-149156 Capsella grandiflora
Cagra.0666s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold666: 136876-146875 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360773 5261 Brassicaceae View MSA
123829550 5264 Brassicales-Malvales View MSA
124348681 5266 SBM View MSA
124247795 5268 Malvidae View MSA
124066236 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain