Gene : Cagra.0682s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11751:SF126 - TRYPTOPHAN AMINOTRANSFERASE-RELATED PROTEIN 3-RELATED Genomic Order:  7
Name:  ? Cagra.0682s0007 Secondary Identifier:  ? PAC:28893700
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0682s0007 0.5kb upstream 0.5kb upstream 2241 true Scaffold682: 31568-33808 Capsella grandiflora
Cagra.0682s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold682: 31568-32067 Capsella grandiflora
Cagra.0682s0007 0.5kb downstream 0.5kb downstream 2241 true Scaffold682: 32068-34308 Capsella grandiflora
Cagra.0682s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold682: 33809-34308 Capsella grandiflora
Cagra.0682s0007 1.0kb upstream 1.0kb upstream 2741 true Scaffold682: 31068-33808 Capsella grandiflora
Cagra.0682s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold682: 31068-32067 Capsella grandiflora
Cagra.0682s0007 1.0kb downstream 1.0kb downstream 2741 true Scaffold682: 32068-34808 Capsella grandiflora
Cagra.0682s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold682: 33809-34808 Capsella grandiflora
Cagra.0682s0007 2.0kb upstream 2.0kb upstream 3741 true Scaffold682: 30068-33808 Capsella grandiflora
Cagra.0682s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold682: 30068-32067 Capsella grandiflora
Cagra.0682s0007 2.0kb downstream 2.0kb downstream 3369 true Scaffold682: 32068-35436 Capsella grandiflora
Cagra.0682s0007 2.0kb downstream 2.0kb downstream 1628 false Scaffold682: 33809-35436 Capsella grandiflora
Cagra.0682s0007 5.0kb upstream 5.0kb upstream 6741 true Scaffold682: 27068-33808 Capsella grandiflora
Cagra.0682s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold682: 27068-32067 Capsella grandiflora
Cagra.0682s0007 5.0kb downstream 5.0kb downstream 3369 true Scaffold682: 32068-35436 Capsella grandiflora
Cagra.0682s0007 5.0kb downstream 5.0kb downstream 1628 false Scaffold682: 33809-35436 Capsella grandiflora
Cagra.0682s0007 10.0kb upstream 10.0kb upstream 11741 true Scaffold682: 22068-33808 Capsella grandiflora
Cagra.0682s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold682: 22068-32067 Capsella grandiflora
Cagra.0682s0007 10.0kb downstream 10.0kb downstream 3369 true Scaffold682: 32068-35436 Capsella grandiflora
Cagra.0682s0007 10.0kb downstream 10.0kb downstream 1628 false Scaffold682: 33809-35436 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029689 5273 Angiosperm View MSA
122369595 5261 Brassicaceae View MSA
123840293 5264 Brassicales-Malvales View MSA
124348817 5266 SBM View MSA
124239139 5268 Malvidae View MSA
124068463 5270 Rosid View MSA
123752024 5271 Pentapetalae View MSA
122788339 5272 Eudicot View MSA
121345504 5274 Embryophyte View MSA
123380229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain