Gene : Cagra.0684s0019 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31533:SF2 - GPI-ANCHORED PROTEIN LORELEI-RELATED Genomic Order:  19
Name:  ? Cagra.0684s0019 Secondary Identifier:  ? PAC:28908087
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0684s0019 0.5kb upstream 0.5kb upstream 1874 true Scaffold684: 51814-53687 Capsella grandiflora
Cagra.0684s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold684: 51814-52313 Capsella grandiflora
Cagra.0684s0019 0.5kb downstream 0.5kb downstream 1874 true Scaffold684: 52314-54187 Capsella grandiflora
Cagra.0684s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold684: 53688-54187 Capsella grandiflora
Cagra.0684s0019 1.0kb upstream 1.0kb upstream 2374 true Scaffold684: 51314-53687 Capsella grandiflora
Cagra.0684s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold684: 51314-52313 Capsella grandiflora
Cagra.0684s0019 1.0kb downstream 1.0kb downstream 2374 true Scaffold684: 52314-54687 Capsella grandiflora
Cagra.0684s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold684: 53688-54687 Capsella grandiflora
Cagra.0684s0019 2.0kb upstream 2.0kb upstream 3374 true Scaffold684: 50314-53687 Capsella grandiflora
Cagra.0684s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold684: 50314-52313 Capsella grandiflora
Cagra.0684s0019 2.0kb downstream 2.0kb downstream 3374 true Scaffold684: 52314-55687 Capsella grandiflora
Cagra.0684s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold684: 53688-55687 Capsella grandiflora
Cagra.0684s0019 5.0kb upstream 5.0kb upstream 6374 true Scaffold684: 47314-53687 Capsella grandiflora
Cagra.0684s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold684: 47314-52313 Capsella grandiflora
Cagra.0684s0019 5.0kb downstream 5.0kb downstream 6374 true Scaffold684: 52314-58687 Capsella grandiflora
Cagra.0684s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold684: 53688-58687 Capsella grandiflora
Cagra.0684s0019 10.0kb upstream 10.0kb upstream 11374 true Scaffold684: 42314-53687 Capsella grandiflora
Cagra.0684s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold684: 42314-52313 Capsella grandiflora
Cagra.0684s0019 10.0kb downstream 10.0kb downstream 11374 true Scaffold684: 52314-63687 Capsella grandiflora
Cagra.0684s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold684: 53688-63687 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511701 5273 Angiosperm View MSA
122378278 5261 Brassicaceae View MSA
123801811 5264 Brassicales-Malvales View MSA
124299070 5266 SBM View MSA
124150573 5268 Malvidae View MSA
123876164 5270 Rosid View MSA
123459875 5271 Pentapetalae View MSA
122495258 5272 Eudicot View MSA
121350043 5274 Embryophyte View MSA
123381553 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain