Gene : Cagra.0891s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR26402:SF558 - TWO-COMPONENT RESPONSE REGULATOR ARR18 Genomic Order:  3
Name:  ? Cagra.0891s0003 Secondary Identifier:  ? PAC:28912886
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0891s0003 0.5kb upstream 0.5kb upstream 4515 true Scaffold891: 4784-9298 Capsella grandiflora
Cagra.0891s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold891: 8799-9298 Capsella grandiflora
Cagra.0891s0003 0.5kb downstream 0.5kb downstream 4515 true Scaffold891: 4284-8798 Capsella grandiflora
Cagra.0891s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold891: 4284-4783 Capsella grandiflora
Cagra.0891s0003 1.0kb upstream 1.0kb upstream 5015 true Scaffold891: 4784-9798 Capsella grandiflora
Cagra.0891s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold891: 8799-9798 Capsella grandiflora
Cagra.0891s0003 1.0kb downstream 1.0kb downstream 5015 true Scaffold891: 3784-8798 Capsella grandiflora
Cagra.0891s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold891: 3784-4783 Capsella grandiflora
Cagra.0891s0003 2.0kb upstream 2.0kb upstream 6015 true Scaffold891: 4784-10798 Capsella grandiflora
Cagra.0891s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold891: 8799-10798 Capsella grandiflora
Cagra.0891s0003 2.0kb downstream 2.0kb downstream 6015 true Scaffold891: 2784-8798 Capsella grandiflora
Cagra.0891s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold891: 2784-4783 Capsella grandiflora
Cagra.0891s0003 5.0kb upstream 5.0kb upstream 9015 true Scaffold891: 4784-13798 Capsella grandiflora
Cagra.0891s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold891: 8799-13798 Capsella grandiflora
Cagra.0891s0003 5.0kb downstream 5.0kb downstream 8798 true Scaffold891: 1-8798 Capsella grandiflora
Cagra.0891s0003 5.0kb downstream 5.0kb downstream 4783 false Scaffold891: 1-4783 Capsella grandiflora
Cagra.0891s0003 10.0kb upstream 10.0kb upstream 14015 true Scaffold891: 4784-18798 Capsella grandiflora
Cagra.0891s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold891: 8799-18798 Capsella grandiflora
Cagra.0891s0003 10.0kb downstream 10.0kb downstream 8798 true Scaffold891: 1-8798 Capsella grandiflora
Cagra.0891s0003 10.0kb downstream 10.0kb downstream 4783 false Scaffold891: 1-4783 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375814 5261 Brassicaceae View MSA
123841325 5264 Brassicales-Malvales View MSA
124337488 5266 SBM View MSA
124238819 5268 Malvidae View MSA
124066556 5270 Rosid View MSA
123743019 5271 Pentapetalae View MSA
122794992 5272 Eudicot View MSA
122046699 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351259 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain