Gene : Cagra.0891s0055 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32285:SF14 - PROTEIN PMR5-RELATED Genomic Order:  55
Name:  ? Cagra.0891s0055 Secondary Identifier:  ? PAC:28912882
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0891s0055 0.5kb upstream 0.5kb upstream 2352 true Scaffold891: 196572-198923 Capsella grandiflora
Cagra.0891s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold891: 198424-198923 Capsella grandiflora
Cagra.0891s0055 0.5kb downstream 0.5kb downstream 2352 true Scaffold891: 196072-198423 Capsella grandiflora
Cagra.0891s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold891: 196072-196571 Capsella grandiflora
Cagra.0891s0055 1.0kb upstream 1.0kb upstream 2852 true Scaffold891: 196572-199423 Capsella grandiflora
Cagra.0891s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold891: 198424-199423 Capsella grandiflora
Cagra.0891s0055 1.0kb downstream 1.0kb downstream 2852 true Scaffold891: 195572-198423 Capsella grandiflora
Cagra.0891s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold891: 195572-196571 Capsella grandiflora
Cagra.0891s0055 2.0kb upstream 2.0kb upstream 3852 true Scaffold891: 196572-200423 Capsella grandiflora
Cagra.0891s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold891: 198424-200423 Capsella grandiflora
Cagra.0891s0055 2.0kb downstream 2.0kb downstream 3852 true Scaffold891: 194572-198423 Capsella grandiflora
Cagra.0891s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold891: 194572-196571 Capsella grandiflora
Cagra.0891s0055 5.0kb upstream 5.0kb upstream 6852 true Scaffold891: 196572-203423 Capsella grandiflora
Cagra.0891s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold891: 198424-203423 Capsella grandiflora
Cagra.0891s0055 5.0kb downstream 5.0kb downstream 6852 true Scaffold891: 191572-198423 Capsella grandiflora
Cagra.0891s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold891: 191572-196571 Capsella grandiflora
Cagra.0891s0055 10.0kb upstream 10.0kb upstream 11852 true Scaffold891: 196572-208423 Capsella grandiflora
Cagra.0891s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold891: 198424-208423 Capsella grandiflora
Cagra.0891s0055 10.0kb downstream 10.0kb downstream 11852 true Scaffold891: 186572-198423 Capsella grandiflora
Cagra.0891s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold891: 186572-196571 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365808 5261 Brassicaceae View MSA
123831575 5264 Brassicales-Malvales View MSA
124339206 5266 SBM View MSA
124237594 5268 Malvidae View MSA
124066732 5270 Rosid View MSA
123736595 5271 Pentapetalae View MSA
122792961 5272 Eudicot View MSA
122042931 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121310047 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain