Gene : Cagra.0891s0058 C. grandiflora v1.1
Defline:  (1 of 2) PTHR35499:SF2 - ALC-INTERACTING PROTEIN 1 Genomic Order:  58
Name:  ? Cagra.0891s0058 Secondary Identifier:  ? PAC:28912919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0891s0058 0.5kb upstream 0.5kb upstream 1707 true Scaffold891: 210950-212656 Capsella grandiflora
Cagra.0891s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold891: 212157-212656 Capsella grandiflora
Cagra.0891s0058 0.5kb downstream 0.5kb downstream 1707 true Scaffold891: 210450-212156 Capsella grandiflora
Cagra.0891s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold891: 210450-210949 Capsella grandiflora
Cagra.0891s0058 1.0kb upstream 1.0kb upstream 2207 true Scaffold891: 210950-213156 Capsella grandiflora
Cagra.0891s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold891: 212157-213156 Capsella grandiflora
Cagra.0891s0058 1.0kb downstream 1.0kb downstream 2207 true Scaffold891: 209950-212156 Capsella grandiflora
Cagra.0891s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold891: 209950-210949 Capsella grandiflora
Cagra.0891s0058 2.0kb upstream 2.0kb upstream 3207 true Scaffold891: 210950-214156 Capsella grandiflora
Cagra.0891s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold891: 212157-214156 Capsella grandiflora
Cagra.0891s0058 2.0kb downstream 2.0kb downstream 3207 true Scaffold891: 208950-212156 Capsella grandiflora
Cagra.0891s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold891: 208950-210949 Capsella grandiflora
Cagra.0891s0058 5.0kb upstream 5.0kb upstream 6207 true Scaffold891: 210950-217156 Capsella grandiflora
Cagra.0891s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold891: 212157-217156 Capsella grandiflora
Cagra.0891s0058 5.0kb downstream 5.0kb downstream 6207 true Scaffold891: 205950-212156 Capsella grandiflora
Cagra.0891s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold891: 205950-210949 Capsella grandiflora
Cagra.0891s0058 10.0kb upstream 10.0kb upstream 11207 true Scaffold891: 210950-222156 Capsella grandiflora
Cagra.0891s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold891: 212157-222156 Capsella grandiflora
Cagra.0891s0058 10.0kb downstream 10.0kb downstream 11207 true Scaffold891: 200950-212156 Capsella grandiflora
Cagra.0891s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold891: 200950-210949 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374551 5261 Brassicaceae View MSA
123834896 5264 Brassicales-Malvales View MSA
124321977 5266 SBM View MSA
124253688 5268 Malvidae View MSA
124062218 5270 Rosid View MSA
123751087 5271 Pentapetalae View MSA
122789400 5272 Eudicot View MSA
122050315 5273 Angiosperm View MSA
121311850 5274 Embryophyte View MSA
123349090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain