Gene : Cagra.0891s0066 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  66
Name:  ? Cagra.0891s0066 Secondary Identifier:  ? PAC:28912891
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0891s0066 0.5kb upstream 0.5kb upstream 2279 true Scaffold891: 232571-234849 Capsella grandiflora
Cagra.0891s0066 0.5kb upstream 0.5kb upstream 500 false Scaffold891: 232571-233070 Capsella grandiflora
Cagra.0891s0066 0.5kb downstream 0.5kb downstream 2279 true Scaffold891: 233071-235349 Capsella grandiflora
Cagra.0891s0066 0.5kb downstream 0.5kb downstream 500 false Scaffold891: 234850-235349 Capsella grandiflora
Cagra.0891s0066 1.0kb upstream 1.0kb upstream 2779 true Scaffold891: 232071-234849 Capsella grandiflora
Cagra.0891s0066 1.0kb upstream 1.0kb upstream 1000 false Scaffold891: 232071-233070 Capsella grandiflora
Cagra.0891s0066 1.0kb downstream 1.0kb downstream 2779 true Scaffold891: 233071-235849 Capsella grandiflora
Cagra.0891s0066 1.0kb downstream 1.0kb downstream 1000 false Scaffold891: 234850-235849 Capsella grandiflora
Cagra.0891s0066 2.0kb upstream 2.0kb upstream 3779 true Scaffold891: 231071-234849 Capsella grandiflora
Cagra.0891s0066 2.0kb upstream 2.0kb upstream 2000 false Scaffold891: 231071-233070 Capsella grandiflora
Cagra.0891s0066 2.0kb downstream 2.0kb downstream 3779 true Scaffold891: 233071-236849 Capsella grandiflora
Cagra.0891s0066 2.0kb downstream 2.0kb downstream 2000 false Scaffold891: 234850-236849 Capsella grandiflora
Cagra.0891s0066 5.0kb upstream 5.0kb upstream 6779 true Scaffold891: 228071-234849 Capsella grandiflora
Cagra.0891s0066 5.0kb upstream 5.0kb upstream 5000 false Scaffold891: 228071-233070 Capsella grandiflora
Cagra.0891s0066 5.0kb downstream 5.0kb downstream 6779 true Scaffold891: 233071-239849 Capsella grandiflora
Cagra.0891s0066 5.0kb downstream 5.0kb downstream 5000 false Scaffold891: 234850-239849 Capsella grandiflora
Cagra.0891s0066 10.0kb upstream 10.0kb upstream 11779 true Scaffold891: 223071-234849 Capsella grandiflora
Cagra.0891s0066 10.0kb upstream 10.0kb upstream 10000 false Scaffold891: 223071-233070 Capsella grandiflora
Cagra.0891s0066 10.0kb downstream 10.0kb downstream 11779 true Scaffold891: 233071-244849 Capsella grandiflora
Cagra.0891s0066 10.0kb downstream 10.0kb downstream 10000 false Scaffold891: 234850-244849 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371468 5261 Brassicaceae View MSA
123835455 5264 Brassicales-Malvales View MSA
124342562 5266 SBM View MSA
124240718 5268 Malvidae View MSA
124063995 5270 Rosid View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain