Gene : Cagra.0878s0003 C. grandiflora v1.1
Defline:  (1 of 4) PTHR18952:SF111 - ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  3
Name:  ? Cagra.0878s0003 Secondary Identifier:  ? PAC:28911212
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CYANCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-241 Capsella grandiflora pathologic  
Cgrandiflora PWY-7115 Capsella grandiflora pathologic  
Cgrandiflora PWY-7117 Capsella grandiflora pathologic  
Cgrandiflora PWYQT-4429 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0878s0003 0.5kb upstream 0.5kb upstream 2091 true Scaffold878: 3912-6002 Capsella grandiflora
Cagra.0878s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold878: 3912-4411 Capsella grandiflora
Cagra.0878s0003 0.5kb downstream 0.5kb downstream 2091 true Scaffold878: 4412-6502 Capsella grandiflora
Cagra.0878s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold878: 6003-6502 Capsella grandiflora
Cagra.0878s0003 1.0kb upstream 1.0kb upstream 2591 true Scaffold878: 3412-6002 Capsella grandiflora
Cagra.0878s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold878: 3412-4411 Capsella grandiflora
Cagra.0878s0003 1.0kb downstream 1.0kb downstream 2591 true Scaffold878: 4412-7002 Capsella grandiflora
Cagra.0878s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold878: 6003-7002 Capsella grandiflora
Cagra.0878s0003 2.0kb upstream 2.0kb upstream 3591 true Scaffold878: 2412-6002 Capsella grandiflora
Cagra.0878s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold878: 2412-4411 Capsella grandiflora
Cagra.0878s0003 2.0kb downstream 2.0kb downstream 3591 true Scaffold878: 4412-8002 Capsella grandiflora
Cagra.0878s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold878: 6003-8002 Capsella grandiflora
Cagra.0878s0003 5.0kb upstream 5.0kb upstream 6002 true Scaffold878: 1-6002 Capsella grandiflora
Cagra.0878s0003 5.0kb upstream 5.0kb upstream 4411 false Scaffold878: 1-4411 Capsella grandiflora
Cagra.0878s0003 5.0kb downstream 5.0kb downstream 6591 true Scaffold878: 4412-11002 Capsella grandiflora
Cagra.0878s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold878: 6003-11002 Capsella grandiflora
Cagra.0878s0003 10.0kb upstream 10.0kb upstream 6002 true Scaffold878: 1-6002 Capsella grandiflora
Cagra.0878s0003 10.0kb upstream 10.0kb upstream 4411 false Scaffold878: 1-4411 Capsella grandiflora
Cagra.0878s0003 10.0kb downstream 10.0kb downstream 11591 true Scaffold878: 4412-16002 Capsella grandiflora
Cagra.0878s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold878: 6003-16002 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510291 5273 Angiosperm View MSA
122361579 5261 Brassicaceae View MSA
123798204 5264 Brassicales-Malvales View MSA
124295875 5266 SBM View MSA
124148192 5268 Malvidae View MSA
123874239 5270 Rosid View MSA
123458243 5271 Pentapetalae View MSA
122493651 5272 Eudicot View MSA
120783396 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain