Gene : Cagra.0860s0015 C. grandiflora v1.1
Defline:  (1 of 33) PF03000 - NPH3 family (NPH3) Genomic Order:  15
Name:  ? Cagra.0860s0015 Secondary Identifier:  ? PAC:28901389
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0860s0015 0.5kb upstream 0.5kb upstream 3329 true Scaffold860: 69687-73015 Capsella grandiflora
Cagra.0860s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold860: 69687-70186 Capsella grandiflora
Cagra.0860s0015 0.5kb downstream 0.5kb downstream 3329 true Scaffold860: 70187-73515 Capsella grandiflora
Cagra.0860s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold860: 73016-73515 Capsella grandiflora
Cagra.0860s0015 1.0kb upstream 1.0kb upstream 3829 true Scaffold860: 69187-73015 Capsella grandiflora
Cagra.0860s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold860: 69187-70186 Capsella grandiflora
Cagra.0860s0015 1.0kb downstream 1.0kb downstream 3829 true Scaffold860: 70187-74015 Capsella grandiflora
Cagra.0860s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold860: 73016-74015 Capsella grandiflora
Cagra.0860s0015 2.0kb upstream 2.0kb upstream 4829 true Scaffold860: 68187-73015 Capsella grandiflora
Cagra.0860s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold860: 68187-70186 Capsella grandiflora
Cagra.0860s0015 2.0kb downstream 2.0kb downstream 4829 true Scaffold860: 70187-75015 Capsella grandiflora
Cagra.0860s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold860: 73016-75015 Capsella grandiflora
Cagra.0860s0015 5.0kb upstream 5.0kb upstream 7829 true Scaffold860: 65187-73015 Capsella grandiflora
Cagra.0860s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold860: 65187-70186 Capsella grandiflora
Cagra.0860s0015 5.0kb downstream 5.0kb downstream 7829 true Scaffold860: 70187-78015 Capsella grandiflora
Cagra.0860s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold860: 73016-78015 Capsella grandiflora
Cagra.0860s0015 10.0kb upstream 10.0kb upstream 12829 true Scaffold860: 60187-73015 Capsella grandiflora
Cagra.0860s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold860: 60187-70186 Capsella grandiflora
Cagra.0860s0015 10.0kb downstream 10.0kb downstream 12829 true Scaffold860: 70187-83015 Capsella grandiflora
Cagra.0860s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold860: 73016-83015 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369848 5261 Brassicaceae View MSA
123799855 5264 Brassicales-Malvales View MSA
124297336 5266 SBM View MSA
124247811 5268 Malvidae View MSA
124071216 5270 Rosid View MSA
123750783 5271 Pentapetalae View MSA
122794459 5272 Eudicot View MSA
122048386 5273 Angiosperm View MSA
121349864 5274 Embryophyte View MSA
123381475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain