Gene : Cagra.0860s0024 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23074:SF95 - AAA-TYPE ATPASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  24
Name:  ? Cagra.0860s0024 Secondary Identifier:  ? PAC:28901382
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0860s0024 0.5kb upstream 0.5kb upstream 9688 true Scaffold860: 108611-118298 Capsella grandiflora
Cagra.0860s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold860: 108611-109110 Capsella grandiflora
Cagra.0860s0024 0.5kb downstream 0.5kb downstream 9688 true Scaffold860: 109111-118798 Capsella grandiflora
Cagra.0860s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold860: 118299-118798 Capsella grandiflora
Cagra.0860s0024 1.0kb upstream 1.0kb upstream 10188 true Scaffold860: 108111-118298 Capsella grandiflora
Cagra.0860s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold860: 108111-109110 Capsella grandiflora
Cagra.0860s0024 1.0kb downstream 1.0kb downstream 10188 true Scaffold860: 109111-119298 Capsella grandiflora
Cagra.0860s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold860: 118299-119298 Capsella grandiflora
Cagra.0860s0024 2.0kb upstream 2.0kb upstream 11188 true Scaffold860: 107111-118298 Capsella grandiflora
Cagra.0860s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold860: 107111-109110 Capsella grandiflora
Cagra.0860s0024 2.0kb downstream 2.0kb downstream 11188 true Scaffold860: 109111-120298 Capsella grandiflora
Cagra.0860s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold860: 118299-120298 Capsella grandiflora
Cagra.0860s0024 5.0kb upstream 5.0kb upstream 14188 true Scaffold860: 104111-118298 Capsella grandiflora
Cagra.0860s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold860: 104111-109110 Capsella grandiflora
Cagra.0860s0024 5.0kb downstream 5.0kb downstream 14188 true Scaffold860: 109111-123298 Capsella grandiflora
Cagra.0860s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold860: 118299-123298 Capsella grandiflora
Cagra.0860s0024 10.0kb upstream 10.0kb upstream 19188 true Scaffold860: 99111-118298 Capsella grandiflora
Cagra.0860s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold860: 99111-109110 Capsella grandiflora
Cagra.0860s0024 10.0kb downstream 10.0kb downstream 19188 true Scaffold860: 109111-128298 Capsella grandiflora
Cagra.0860s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold860: 118299-128298 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368511 5261 Brassicaceae View MSA
123836103 5264 Brassicales-Malvales View MSA
124322132 5266 SBM View MSA
124249795 5268 Malvidae View MSA
124068786 5270 Rosid View MSA
123736578 5271 Pentapetalae View MSA
122786690 5272 Eudicot View MSA
122044741 5273 Angiosperm View MSA
121348057 5274 Embryophyte View MSA
123380716 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain