Gene : Cagra.0876s0024 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33044:SF5 - PROTEASE INHIBITOR/SEED STORAGE/LIPID TRANSFER PROTEIN FAMILY PROTEIN Genomic Order:  24
Name:  ? Cagra.0876s0024 Secondary Identifier:  ? PAC:28899210
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0876s0024 0.5kb upstream 0.5kb upstream 1293 true Scaffold876: 74870-76162 Capsella grandiflora
Cagra.0876s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold876: 75663-76162 Capsella grandiflora
Cagra.0876s0024 0.5kb downstream 0.5kb downstream 1293 true Scaffold876: 74370-75662 Capsella grandiflora
Cagra.0876s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold876: 74370-74869 Capsella grandiflora
Cagra.0876s0024 1.0kb upstream 1.0kb upstream 1793 true Scaffold876: 74870-76662 Capsella grandiflora
Cagra.0876s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold876: 75663-76662 Capsella grandiflora
Cagra.0876s0024 1.0kb downstream 1.0kb downstream 1793 true Scaffold876: 73870-75662 Capsella grandiflora
Cagra.0876s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold876: 73870-74869 Capsella grandiflora
Cagra.0876s0024 2.0kb upstream 2.0kb upstream 2793 true Scaffold876: 74870-77662 Capsella grandiflora
Cagra.0876s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold876: 75663-77662 Capsella grandiflora
Cagra.0876s0024 2.0kb downstream 2.0kb downstream 2793 true Scaffold876: 72870-75662 Capsella grandiflora
Cagra.0876s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold876: 72870-74869 Capsella grandiflora
Cagra.0876s0024 5.0kb upstream 5.0kb upstream 5793 true Scaffold876: 74870-80662 Capsella grandiflora
Cagra.0876s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold876: 75663-80662 Capsella grandiflora
Cagra.0876s0024 5.0kb downstream 5.0kb downstream 5793 true Scaffold876: 69870-75662 Capsella grandiflora
Cagra.0876s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold876: 69870-74869 Capsella grandiflora
Cagra.0876s0024 10.0kb upstream 10.0kb upstream 10793 true Scaffold876: 74870-85662 Capsella grandiflora
Cagra.0876s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold876: 75663-85662 Capsella grandiflora
Cagra.0876s0024 10.0kb downstream 10.0kb downstream 10793 true Scaffold876: 64870-75662 Capsella grandiflora
Cagra.0876s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold876: 64870-74869 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365318 5261 Brassicaceae View MSA
123836948 5264 Brassicales-Malvales View MSA
124340141 5266 SBM View MSA
124239228 5268 Malvidae View MSA
124063139 5270 Rosid View MSA
123741204 5271 Pentapetalae View MSA
122796719 5272 Eudicot View MSA
122046697 5273 Angiosperm View MSA
121350962 5274 Embryophyte View MSA
123381949 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain