Gene : Cagra.0876s0018 C. grandiflora v1.1
Defline:  (1 of 5) PF07891 - Protein of unknown function (DUF1666) (DUF1666) Genomic Order:  18
Name:  ? Cagra.0876s0018 Secondary Identifier:  ? PAC:28899234
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0876s0018 0.5kb upstream 0.5kb upstream 4062 true Scaffold876: 52723-56784 Capsella grandiflora
Cagra.0876s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold876: 52723-53222 Capsella grandiflora
Cagra.0876s0018 0.5kb downstream 0.5kb downstream 4062 true Scaffold876: 53223-57284 Capsella grandiflora
Cagra.0876s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold876: 56785-57284 Capsella grandiflora
Cagra.0876s0018 1.0kb upstream 1.0kb upstream 4562 true Scaffold876: 52223-56784 Capsella grandiflora
Cagra.0876s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold876: 52223-53222 Capsella grandiflora
Cagra.0876s0018 1.0kb downstream 1.0kb downstream 4562 true Scaffold876: 53223-57784 Capsella grandiflora
Cagra.0876s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold876: 56785-57784 Capsella grandiflora
Cagra.0876s0018 2.0kb upstream 2.0kb upstream 5562 true Scaffold876: 51223-56784 Capsella grandiflora
Cagra.0876s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold876: 51223-53222 Capsella grandiflora
Cagra.0876s0018 2.0kb downstream 2.0kb downstream 5562 true Scaffold876: 53223-58784 Capsella grandiflora
Cagra.0876s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold876: 56785-58784 Capsella grandiflora
Cagra.0876s0018 5.0kb upstream 5.0kb upstream 8562 true Scaffold876: 48223-56784 Capsella grandiflora
Cagra.0876s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold876: 48223-53222 Capsella grandiflora
Cagra.0876s0018 5.0kb downstream 5.0kb downstream 8562 true Scaffold876: 53223-61784 Capsella grandiflora
Cagra.0876s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold876: 56785-61784 Capsella grandiflora
Cagra.0876s0018 10.0kb upstream 10.0kb upstream 13562 true Scaffold876: 43223-56784 Capsella grandiflora
Cagra.0876s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold876: 43223-53222 Capsella grandiflora
Cagra.0876s0018 10.0kb downstream 10.0kb downstream 13562 true Scaffold876: 53223-66784 Capsella grandiflora
Cagra.0876s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold876: 56785-66784 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363095 5261 Brassicaceae View MSA
123835542 5264 Brassicales-Malvales View MSA
124345271 5266 SBM View MSA
124242129 5268 Malvidae View MSA
124068930 5270 Rosid View MSA
123742877 5271 Pentapetalae View MSA
122788771 5272 Eudicot View MSA
122042848 5273 Angiosperm View MSA
121310034 5274 Embryophyte View MSA
123347637 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain