Gene : Cagra.0876s0020 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31874:SF1 - CCT MOTIF FAMILY PROTEIN-RELATED Genomic Order:  20
Name:  ? Cagra.0876s0020 Secondary Identifier:  ? PAC:28899232
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0876s0020 0.5kb upstream 0.5kb upstream 2033 true Scaffold876: 65383-67415 Capsella grandiflora
Cagra.0876s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold876: 65383-65882 Capsella grandiflora
Cagra.0876s0020 0.5kb downstream 0.5kb downstream 2033 true Scaffold876: 65883-67915 Capsella grandiflora
Cagra.0876s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold876: 67416-67915 Capsella grandiflora
Cagra.0876s0020 1.0kb upstream 1.0kb upstream 2533 true Scaffold876: 64883-67415 Capsella grandiflora
Cagra.0876s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold876: 64883-65882 Capsella grandiflora
Cagra.0876s0020 1.0kb downstream 1.0kb downstream 2533 true Scaffold876: 65883-68415 Capsella grandiflora
Cagra.0876s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold876: 67416-68415 Capsella grandiflora
Cagra.0876s0020 2.0kb upstream 2.0kb upstream 3533 true Scaffold876: 63883-67415 Capsella grandiflora
Cagra.0876s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold876: 63883-65882 Capsella grandiflora
Cagra.0876s0020 2.0kb downstream 2.0kb downstream 3533 true Scaffold876: 65883-69415 Capsella grandiflora
Cagra.0876s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold876: 67416-69415 Capsella grandiflora
Cagra.0876s0020 5.0kb upstream 5.0kb upstream 6533 true Scaffold876: 60883-67415 Capsella grandiflora
Cagra.0876s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold876: 60883-65882 Capsella grandiflora
Cagra.0876s0020 5.0kb downstream 5.0kb downstream 6533 true Scaffold876: 65883-72415 Capsella grandiflora
Cagra.0876s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold876: 67416-72415 Capsella grandiflora
Cagra.0876s0020 10.0kb upstream 10.0kb upstream 11533 true Scaffold876: 55883-67415 Capsella grandiflora
Cagra.0876s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold876: 55883-65882 Capsella grandiflora
Cagra.0876s0020 10.0kb downstream 10.0kb downstream 11533 true Scaffold876: 65883-77415 Capsella grandiflora
Cagra.0876s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold876: 67416-77415 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343565 5261 Brassicaceae View MSA
123783727 5264 Brassicales-Malvales View MSA
124281942 5266 SBM View MSA
124136614 5268 Malvidae View MSA
124061495 5270 Rosid View MSA
123743712 5271 Pentapetalae View MSA
122787534 5272 Eudicot View MSA
122046214 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351074 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain