Gene : Cagra.0844s0050 C. grandiflora v1.1
Defline:  (1 of 5) PTHR33286:SF1 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED Genomic Order:  50
Name:  ? Cagra.0844s0050 Secondary Identifier:  ? PAC:28914912
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0844s0050 0.5kb upstream 0.5kb upstream 1149 true Scaffold844: 193385-194533 Capsella grandiflora
Cagra.0844s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold844: 193385-193884 Capsella grandiflora
Cagra.0844s0050 0.5kb downstream 0.5kb downstream 682 true Scaffold844: 193885-194566 Capsella grandiflora
Cagra.0844s0050 0.5kb downstream 0.5kb downstream 33 false Scaffold844: 194534-194566 Capsella grandiflora
Cagra.0844s0050 1.0kb upstream 1.0kb upstream 1649 true Scaffold844: 192885-194533 Capsella grandiflora
Cagra.0844s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold844: 192885-193884 Capsella grandiflora
Cagra.0844s0050 1.0kb downstream 1.0kb downstream 682 true Scaffold844: 193885-194566 Capsella grandiflora
Cagra.0844s0050 1.0kb downstream 1.0kb downstream 33 false Scaffold844: 194534-194566 Capsella grandiflora
Cagra.0844s0050 2.0kb upstream 2.0kb upstream 2649 true Scaffold844: 191885-194533 Capsella grandiflora
Cagra.0844s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold844: 191885-193884 Capsella grandiflora
Cagra.0844s0050 2.0kb downstream 2.0kb downstream 682 true Scaffold844: 193885-194566 Capsella grandiflora
Cagra.0844s0050 2.0kb downstream 2.0kb downstream 33 false Scaffold844: 194534-194566 Capsella grandiflora
Cagra.0844s0050 5.0kb upstream 5.0kb upstream 5649 true Scaffold844: 188885-194533 Capsella grandiflora
Cagra.0844s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold844: 188885-193884 Capsella grandiflora
Cagra.0844s0050 5.0kb downstream 5.0kb downstream 682 true Scaffold844: 193885-194566 Capsella grandiflora
Cagra.0844s0050 5.0kb downstream 5.0kb downstream 33 false Scaffold844: 194534-194566 Capsella grandiflora
Cagra.0844s0050 10.0kb upstream 10.0kb upstream 10649 true Scaffold844: 183885-194533 Capsella grandiflora
Cagra.0844s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold844: 183885-193884 Capsella grandiflora
Cagra.0844s0050 10.0kb downstream 10.0kb downstream 682 true Scaffold844: 193885-194566 Capsella grandiflora
Cagra.0844s0050 10.0kb downstream 10.0kb downstream 33 false Scaffold844: 194534-194566 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367455 5261 Brassicaceae View MSA
123836698 5264 Brassicales-Malvales View MSA
124341404 5266 SBM View MSA
124250886 5268 Malvidae View MSA
124071532 5270 Rosid View MSA
123738328 5271 Pentapetalae View MSA
122795695 5272 Eudicot View MSA
122051357 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain