Gene : Cagra.0846s0019 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATED Genomic Order:  19
Name:  ? Cagra.0846s0019 Secondary Identifier:  ? PAC:28905389
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0846s0019 0.5kb upstream 0.5kb upstream 1935 true Scaffold846: 56993-58927 Capsella grandiflora
Cagra.0846s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold846: 58428-58927 Capsella grandiflora
Cagra.0846s0019 0.5kb downstream 0.5kb downstream 1935 true Scaffold846: 56493-58427 Capsella grandiflora
Cagra.0846s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold846: 56493-56992 Capsella grandiflora
Cagra.0846s0019 1.0kb upstream 1.0kb upstream 2435 true Scaffold846: 56993-59427 Capsella grandiflora
Cagra.0846s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold846: 58428-59427 Capsella grandiflora
Cagra.0846s0019 1.0kb downstream 1.0kb downstream 2435 true Scaffold846: 55993-58427 Capsella grandiflora
Cagra.0846s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold846: 55993-56992 Capsella grandiflora
Cagra.0846s0019 2.0kb upstream 2.0kb upstream 3435 true Scaffold846: 56993-60427 Capsella grandiflora
Cagra.0846s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold846: 58428-60427 Capsella grandiflora
Cagra.0846s0019 2.0kb downstream 2.0kb downstream 3435 true Scaffold846: 54993-58427 Capsella grandiflora
Cagra.0846s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold846: 54993-56992 Capsella grandiflora
Cagra.0846s0019 5.0kb upstream 5.0kb upstream 6435 true Scaffold846: 56993-63427 Capsella grandiflora
Cagra.0846s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold846: 58428-63427 Capsella grandiflora
Cagra.0846s0019 5.0kb downstream 5.0kb downstream 6435 true Scaffold846: 51993-58427 Capsella grandiflora
Cagra.0846s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold846: 51993-56992 Capsella grandiflora
Cagra.0846s0019 10.0kb upstream 10.0kb upstream 11435 true Scaffold846: 56993-68427 Capsella grandiflora
Cagra.0846s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold846: 58428-68427 Capsella grandiflora
Cagra.0846s0019 10.0kb downstream 10.0kb downstream 11435 true Scaffold846: 46993-58427 Capsella grandiflora
Cagra.0846s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold846: 46993-56992 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369243 5261 Brassicaceae View MSA
123837872 5264 Brassicales-Malvales View MSA
124341540 5266 SBM View MSA
124252841 5268 Malvidae View MSA
124062102 5270 Rosid View MSA
123750520 5271 Pentapetalae View MSA
122788879 5272 Eudicot View MSA
122041557 5273 Angiosperm View MSA
121346293 5274 Embryophyte View MSA
123424403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain