Gene : Cagra.0834s0005 C. grandiflora v1.1
Defline:  (1 of 2) 3.2.1.37//3.2.1.55 - Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  5
Name:  ? Cagra.0834s0005 Secondary Identifier:  ? PAC:28903827
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0834s0005 0.5kb upstream 0.5kb upstream 5191 true Scaffold834: 11357-16547 Capsella grandiflora
Cagra.0834s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold834: 11357-11856 Capsella grandiflora
Cagra.0834s0005 0.5kb downstream 0.5kb downstream 5191 true Scaffold834: 11857-17047 Capsella grandiflora
Cagra.0834s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold834: 16548-17047 Capsella grandiflora
Cagra.0834s0005 1.0kb upstream 1.0kb upstream 5691 true Scaffold834: 10857-16547 Capsella grandiflora
Cagra.0834s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold834: 10857-11856 Capsella grandiflora
Cagra.0834s0005 1.0kb downstream 1.0kb downstream 5691 true Scaffold834: 11857-17547 Capsella grandiflora
Cagra.0834s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold834: 16548-17547 Capsella grandiflora
Cagra.0834s0005 2.0kb upstream 2.0kb upstream 6691 true Scaffold834: 9857-16547 Capsella grandiflora
Cagra.0834s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold834: 9857-11856 Capsella grandiflora
Cagra.0834s0005 2.0kb downstream 2.0kb downstream 6691 true Scaffold834: 11857-18547 Capsella grandiflora
Cagra.0834s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold834: 16548-18547 Capsella grandiflora
Cagra.0834s0005 5.0kb upstream 5.0kb upstream 9691 true Scaffold834: 6857-16547 Capsella grandiflora
Cagra.0834s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold834: 6857-11856 Capsella grandiflora
Cagra.0834s0005 5.0kb downstream 5.0kb downstream 9691 true Scaffold834: 11857-21547 Capsella grandiflora
Cagra.0834s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold834: 16548-21547 Capsella grandiflora
Cagra.0834s0005 10.0kb upstream 10.0kb upstream 14691 true Scaffold834: 1857-16547 Capsella grandiflora
Cagra.0834s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold834: 1857-11856 Capsella grandiflora
Cagra.0834s0005 10.0kb downstream 10.0kb downstream 14691 true Scaffold834: 11857-26547 Capsella grandiflora
Cagra.0834s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold834: 16548-26547 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363324 5261 Brassicaceae View MSA
123834543 5264 Brassicales-Malvales View MSA
124341352 5266 SBM View MSA
124240349 5268 Malvidae View MSA
124067000 5270 Rosid View MSA
123739948 5271 Pentapetalae View MSA
122792848 5272 Eudicot View MSA
122044822 5273 Angiosperm View MSA
121344375 5274 Embryophyte View MSA
123428022 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain