Gene : Cagra.0834s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12911 - SAD1/UNC-84-LIKE PROTEIN-RELATED Genomic Order:  6
Name:  ? Cagra.0834s0006 Secondary Identifier:  ? PAC:28903804
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0834s0006 0.5kb upstream 0.5kb upstream 2806 true Scaffold834: 16227-19032 Capsella grandiflora
Cagra.0834s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold834: 16227-16726 Capsella grandiflora
Cagra.0834s0006 0.5kb downstream 0.5kb downstream 2806 true Scaffold834: 16727-19532 Capsella grandiflora
Cagra.0834s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold834: 19033-19532 Capsella grandiflora
Cagra.0834s0006 1.0kb upstream 1.0kb upstream 3306 true Scaffold834: 15727-19032 Capsella grandiflora
Cagra.0834s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold834: 15727-16726 Capsella grandiflora
Cagra.0834s0006 1.0kb downstream 1.0kb downstream 3306 true Scaffold834: 16727-20032 Capsella grandiflora
Cagra.0834s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold834: 19033-20032 Capsella grandiflora
Cagra.0834s0006 2.0kb upstream 2.0kb upstream 4306 true Scaffold834: 14727-19032 Capsella grandiflora
Cagra.0834s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold834: 14727-16726 Capsella grandiflora
Cagra.0834s0006 2.0kb downstream 2.0kb downstream 4306 true Scaffold834: 16727-21032 Capsella grandiflora
Cagra.0834s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold834: 19033-21032 Capsella grandiflora
Cagra.0834s0006 5.0kb upstream 5.0kb upstream 7306 true Scaffold834: 11727-19032 Capsella grandiflora
Cagra.0834s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold834: 11727-16726 Capsella grandiflora
Cagra.0834s0006 5.0kb downstream 5.0kb downstream 7306 true Scaffold834: 16727-24032 Capsella grandiflora
Cagra.0834s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold834: 19033-24032 Capsella grandiflora
Cagra.0834s0006 10.0kb upstream 10.0kb upstream 12306 true Scaffold834: 6727-19032 Capsella grandiflora
Cagra.0834s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold834: 6727-16726 Capsella grandiflora
Cagra.0834s0006 10.0kb downstream 10.0kb downstream 12306 true Scaffold834: 16727-29032 Capsella grandiflora
Cagra.0834s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold834: 19033-29032 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362829 5261 Brassicaceae View MSA
123835498 5264 Brassicales-Malvales View MSA
124337355 5266 SBM View MSA
124243542 5268 Malvidae View MSA
124064133 5270 Rosid View MSA
123737597 5271 Pentapetalae View MSA
122789122 5272 Eudicot View MSA
122047855 5273 Angiosperm View MSA
121344076 5274 Embryophyte View MSA
123425262 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain