Gene : Cagra.0834s0014 C. grandiflora v1.1
Defline:  (1 of 4) KOG0845 - Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116) Genomic Order:  14
Name:  ? Cagra.0834s0014 Secondary Identifier:  ? PAC:28903825
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0834s0014 0.5kb upstream 0.5kb upstream 6305 true Scaffold834: 47262-53566 Capsella grandiflora
Cagra.0834s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold834: 47262-47761 Capsella grandiflora
Cagra.0834s0014 0.5kb downstream 0.5kb downstream 6305 true Scaffold834: 47762-54066 Capsella grandiflora
Cagra.0834s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold834: 53567-54066 Capsella grandiflora
Cagra.0834s0014 1.0kb upstream 1.0kb upstream 6805 true Scaffold834: 46762-53566 Capsella grandiflora
Cagra.0834s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold834: 46762-47761 Capsella grandiflora
Cagra.0834s0014 1.0kb downstream 1.0kb downstream 6805 true Scaffold834: 47762-54566 Capsella grandiflora
Cagra.0834s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold834: 53567-54566 Capsella grandiflora
Cagra.0834s0014 2.0kb upstream 2.0kb upstream 7805 true Scaffold834: 45762-53566 Capsella grandiflora
Cagra.0834s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold834: 45762-47761 Capsella grandiflora
Cagra.0834s0014 2.0kb downstream 2.0kb downstream 7805 true Scaffold834: 47762-55566 Capsella grandiflora
Cagra.0834s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold834: 53567-55566 Capsella grandiflora
Cagra.0834s0014 5.0kb upstream 5.0kb upstream 10805 true Scaffold834: 42762-53566 Capsella grandiflora
Cagra.0834s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold834: 42762-47761 Capsella grandiflora
Cagra.0834s0014 5.0kb downstream 5.0kb downstream 10805 true Scaffold834: 47762-58566 Capsella grandiflora
Cagra.0834s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold834: 53567-58566 Capsella grandiflora
Cagra.0834s0014 10.0kb upstream 10.0kb upstream 15805 true Scaffold834: 37762-53566 Capsella grandiflora
Cagra.0834s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold834: 37762-47761 Capsella grandiflora
Cagra.0834s0014 10.0kb downstream 10.0kb downstream 15805 true Scaffold834: 47762-63566 Capsella grandiflora
Cagra.0834s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold834: 53567-63566 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364498 5261 Brassicaceae View MSA
123827710 5264 Brassicales-Malvales View MSA
124351623 5266 SBM View MSA
124251221 5268 Malvidae View MSA
124068519 5270 Rosid View MSA
123739177 5271 Pentapetalae View MSA
122788918 5272 Eudicot View MSA
122044360 5273 Angiosperm View MSA
121349905 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain