Gene : Cagra.0824s0057 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12810 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29 Genomic Order:  57
Name:  ? Cagra.0824s0057 Secondary Identifier:  ? PAC:28899983
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0057 0.5kb upstream 0.5kb upstream 3011 true Scaffold824: 197076-200086 Capsella grandiflora
Cagra.0824s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 199587-200086 Capsella grandiflora
Cagra.0824s0057 0.5kb downstream 0.5kb downstream 3011 true Scaffold824: 196576-199586 Capsella grandiflora
Cagra.0824s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 196576-197075 Capsella grandiflora
Cagra.0824s0057 1.0kb upstream 1.0kb upstream 3511 true Scaffold824: 197076-200586 Capsella grandiflora
Cagra.0824s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 199587-200586 Capsella grandiflora
Cagra.0824s0057 1.0kb downstream 1.0kb downstream 3511 true Scaffold824: 196076-199586 Capsella grandiflora
Cagra.0824s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 196076-197075 Capsella grandiflora
Cagra.0824s0057 2.0kb upstream 2.0kb upstream 4511 true Scaffold824: 197076-201586 Capsella grandiflora
Cagra.0824s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 199587-201586 Capsella grandiflora
Cagra.0824s0057 2.0kb downstream 2.0kb downstream 4511 true Scaffold824: 195076-199586 Capsella grandiflora
Cagra.0824s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 195076-197075 Capsella grandiflora
Cagra.0824s0057 5.0kb upstream 5.0kb upstream 7511 true Scaffold824: 197076-204586 Capsella grandiflora
Cagra.0824s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 199587-204586 Capsella grandiflora
Cagra.0824s0057 5.0kb downstream 5.0kb downstream 7511 true Scaffold824: 192076-199586 Capsella grandiflora
Cagra.0824s0057 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 192076-197075 Capsella grandiflora
Cagra.0824s0057 10.0kb upstream 10.0kb upstream 12511 true Scaffold824: 197076-209586 Capsella grandiflora
Cagra.0824s0057 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 199587-209586 Capsella grandiflora
Cagra.0824s0057 10.0kb downstream 10.0kb downstream 12511 true Scaffold824: 187076-199586 Capsella grandiflora
Cagra.0824s0057 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 187076-197075 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372200 5261 Brassicaceae View MSA
123831681 5264 Brassicales-Malvales View MSA
124338031 5266 SBM View MSA
124239852 5268 Malvidae View MSA
124061885 5270 Rosid View MSA
123738752 5271 Pentapetalae View MSA
122794378 5272 Eudicot View MSA
122042057 5273 Angiosperm View MSA
121345138 5274 Embryophyte View MSA
123424162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain