Gene : Cagra.0812s0024 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10909:SF250 - PEROXISOMAL ACYL-COENZYME A OXIDASE 2 Genomic Order:  24
Name:  ? Cagra.0812s0024 Secondary Identifier:  ? PAC:28919378
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5136 Capsella grandiflora pathologic  
Cgrandiflora PWY-561 Capsella grandiflora pathologic  
Cgrandiflora PWY-6837 Capsella grandiflora pathologic  
Cgrandiflora PWY-735 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0812s0024 0.5kb upstream 0.5kb upstream 4731 true Scaffold812: 105313-110043 Capsella grandiflora
Cagra.0812s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold812: 105313-105812 Capsella grandiflora
Cagra.0812s0024 0.5kb downstream 0.5kb downstream 4731 true Scaffold812: 105813-110543 Capsella grandiflora
Cagra.0812s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold812: 110044-110543 Capsella grandiflora
Cagra.0812s0024 1.0kb upstream 1.0kb upstream 5231 true Scaffold812: 104813-110043 Capsella grandiflora
Cagra.0812s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold812: 104813-105812 Capsella grandiflora
Cagra.0812s0024 1.0kb downstream 1.0kb downstream 5231 true Scaffold812: 105813-111043 Capsella grandiflora
Cagra.0812s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold812: 110044-111043 Capsella grandiflora
Cagra.0812s0024 2.0kb upstream 2.0kb upstream 6231 true Scaffold812: 103813-110043 Capsella grandiflora
Cagra.0812s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold812: 103813-105812 Capsella grandiflora
Cagra.0812s0024 2.0kb downstream 2.0kb downstream 6231 true Scaffold812: 105813-112043 Capsella grandiflora
Cagra.0812s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold812: 110044-112043 Capsella grandiflora
Cagra.0812s0024 5.0kb upstream 5.0kb upstream 9231 true Scaffold812: 100813-110043 Capsella grandiflora
Cagra.0812s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold812: 100813-105812 Capsella grandiflora
Cagra.0812s0024 5.0kb downstream 5.0kb downstream 9231 true Scaffold812: 105813-115043 Capsella grandiflora
Cagra.0812s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold812: 110044-115043 Capsella grandiflora
Cagra.0812s0024 10.0kb upstream 10.0kb upstream 14231 true Scaffold812: 95813-110043 Capsella grandiflora
Cagra.0812s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold812: 95813-105812 Capsella grandiflora
Cagra.0812s0024 10.0kb downstream 10.0kb downstream 14231 true Scaffold812: 105813-120043 Capsella grandiflora
Cagra.0812s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold812: 110044-120043 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370678 5261 Brassicaceae View MSA
123837272 5264 Brassicales-Malvales View MSA
124342369 5266 SBM View MSA
124238723 5268 Malvidae View MSA
124065660 5270 Rosid View MSA
123739070 5271 Pentapetalae View MSA
122787917 5272 Eudicot View MSA
122045798 5273 Angiosperm View MSA
121345655 5274 Embryophyte View MSA
123428216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain