Gene : Cagra.0812s0026 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11062:SF59 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  26
Name:  ? Cagra.0812s0026 Secondary Identifier:  ? PAC:28919361
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5980 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0812s0026 0.5kb upstream 0.5kb upstream 2369 true Scaffold812: 124205-126573 Capsella grandiflora
Cagra.0812s0026 0.5kb upstream 0.5kb upstream 500 false Scaffold812: 126074-126573 Capsella grandiflora
Cagra.0812s0026 0.5kb downstream 0.5kb downstream 2369 true Scaffold812: 123705-126073 Capsella grandiflora
Cagra.0812s0026 0.5kb downstream 0.5kb downstream 500 false Scaffold812: 123705-124204 Capsella grandiflora
Cagra.0812s0026 1.0kb upstream 1.0kb upstream 2869 true Scaffold812: 124205-127073 Capsella grandiflora
Cagra.0812s0026 1.0kb upstream 1.0kb upstream 1000 false Scaffold812: 126074-127073 Capsella grandiflora
Cagra.0812s0026 1.0kb downstream 1.0kb downstream 2869 true Scaffold812: 123205-126073 Capsella grandiflora
Cagra.0812s0026 1.0kb downstream 1.0kb downstream 1000 false Scaffold812: 123205-124204 Capsella grandiflora
Cagra.0812s0026 2.0kb upstream 2.0kb upstream 3869 true Scaffold812: 124205-128073 Capsella grandiflora
Cagra.0812s0026 2.0kb upstream 2.0kb upstream 2000 false Scaffold812: 126074-128073 Capsella grandiflora
Cagra.0812s0026 2.0kb downstream 2.0kb downstream 3869 true Scaffold812: 122205-126073 Capsella grandiflora
Cagra.0812s0026 2.0kb downstream 2.0kb downstream 2000 false Scaffold812: 122205-124204 Capsella grandiflora
Cagra.0812s0026 5.0kb upstream 5.0kb upstream 6869 true Scaffold812: 124205-131073 Capsella grandiflora
Cagra.0812s0026 5.0kb upstream 5.0kb upstream 5000 false Scaffold812: 126074-131073 Capsella grandiflora
Cagra.0812s0026 5.0kb downstream 5.0kb downstream 6869 true Scaffold812: 119205-126073 Capsella grandiflora
Cagra.0812s0026 5.0kb downstream 5.0kb downstream 5000 false Scaffold812: 119205-124204 Capsella grandiflora
Cagra.0812s0026 10.0kb upstream 10.0kb upstream 11869 true Scaffold812: 124205-136073 Capsella grandiflora
Cagra.0812s0026 10.0kb upstream 10.0kb upstream 10000 false Scaffold812: 126074-136073 Capsella grandiflora
Cagra.0812s0026 10.0kb downstream 10.0kb downstream 11869 true Scaffold812: 114205-126073 Capsella grandiflora
Cagra.0812s0026 10.0kb downstream 10.0kb downstream 10000 false Scaffold812: 114205-124204 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374619 5261 Brassicaceae View MSA
123829606 5264 Brassicales-Malvales View MSA
124346076 5266 SBM View MSA
124243747 5268 Malvidae View MSA
124063167 5270 Rosid View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain