Gene : Cagra.0824s0036 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12496 - CGI-41 METHYLTRANSFERASE Genomic Order:  36
Name:  ? Cagra.0824s0036 Secondary Identifier:  ? PAC:28899963
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0824s0036 0.5kb upstream 0.5kb upstream 4279 true Scaffold824: 121188-125466 Capsella grandiflora
Cagra.0824s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold824: 121188-121687 Capsella grandiflora
Cagra.0824s0036 0.5kb downstream 0.5kb downstream 4279 true Scaffold824: 121688-125966 Capsella grandiflora
Cagra.0824s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold824: 125467-125966 Capsella grandiflora
Cagra.0824s0036 1.0kb upstream 1.0kb upstream 4779 true Scaffold824: 120688-125466 Capsella grandiflora
Cagra.0824s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold824: 120688-121687 Capsella grandiflora
Cagra.0824s0036 1.0kb downstream 1.0kb downstream 4779 true Scaffold824: 121688-126466 Capsella grandiflora
Cagra.0824s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold824: 125467-126466 Capsella grandiflora
Cagra.0824s0036 2.0kb upstream 2.0kb upstream 5779 true Scaffold824: 119688-125466 Capsella grandiflora
Cagra.0824s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold824: 119688-121687 Capsella grandiflora
Cagra.0824s0036 2.0kb downstream 2.0kb downstream 5779 true Scaffold824: 121688-127466 Capsella grandiflora
Cagra.0824s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold824: 125467-127466 Capsella grandiflora
Cagra.0824s0036 5.0kb upstream 5.0kb upstream 8779 true Scaffold824: 116688-125466 Capsella grandiflora
Cagra.0824s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold824: 116688-121687 Capsella grandiflora
Cagra.0824s0036 5.0kb downstream 5.0kb downstream 8779 true Scaffold824: 121688-130466 Capsella grandiflora
Cagra.0824s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold824: 125467-130466 Capsella grandiflora
Cagra.0824s0036 10.0kb upstream 10.0kb upstream 13779 true Scaffold824: 111688-125466 Capsella grandiflora
Cagra.0824s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold824: 111688-121687 Capsella grandiflora
Cagra.0824s0036 10.0kb downstream 10.0kb downstream 13779 true Scaffold824: 121688-135466 Capsella grandiflora
Cagra.0824s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold824: 125467-135466 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041435 5273 Angiosperm View MSA
122334363 5261 Brassicaceae Singleton cluster - no MSA
123775211 5264 Brassicales-Malvales Singleton cluster - no MSA
124273624 5266 SBM Singleton cluster - no MSA
124129208 5268 Malvidae Singleton cluster - no MSA
124063111 5270 Rosid View MSA
123747553 5271 Pentapetalae View MSA
122789277 5272 Eudicot View MSA
121344340 5274 Embryophyte View MSA
123380024 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain