Gene : Cagra.0802s0015 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31533:SF2 - GPI-ANCHORED PROTEIN LORELEI-RELATED Genomic Order:  15
Name:  ? Cagra.0802s0015 Secondary Identifier:  ? PAC:28895831
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0802s0015 0.5kb upstream 0.5kb upstream 1208 true Scaffold802: 33867-35074 Capsella grandiflora
Cagra.0802s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold802: 33867-34366 Capsella grandiflora
Cagra.0802s0015 0.5kb downstream 0.5kb downstream 712 true Scaffold802: 34367-35078 Capsella grandiflora
Cagra.0802s0015 0.5kb downstream 0.5kb downstream 4 false Scaffold802: 35075-35078 Capsella grandiflora
Cagra.0802s0015 1.0kb upstream 1.0kb upstream 1708 true Scaffold802: 33367-35074 Capsella grandiflora
Cagra.0802s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold802: 33367-34366 Capsella grandiflora
Cagra.0802s0015 1.0kb downstream 1.0kb downstream 712 true Scaffold802: 34367-35078 Capsella grandiflora
Cagra.0802s0015 1.0kb downstream 1.0kb downstream 4 false Scaffold802: 35075-35078 Capsella grandiflora
Cagra.0802s0015 2.0kb upstream 2.0kb upstream 2708 true Scaffold802: 32367-35074 Capsella grandiflora
Cagra.0802s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold802: 32367-34366 Capsella grandiflora
Cagra.0802s0015 2.0kb downstream 2.0kb downstream 712 true Scaffold802: 34367-35078 Capsella grandiflora
Cagra.0802s0015 2.0kb downstream 2.0kb downstream 4 false Scaffold802: 35075-35078 Capsella grandiflora
Cagra.0802s0015 5.0kb upstream 5.0kb upstream 5708 true Scaffold802: 29367-35074 Capsella grandiflora
Cagra.0802s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold802: 29367-34366 Capsella grandiflora
Cagra.0802s0015 5.0kb downstream 5.0kb downstream 712 true Scaffold802: 34367-35078 Capsella grandiflora
Cagra.0802s0015 5.0kb downstream 5.0kb downstream 4 false Scaffold802: 35075-35078 Capsella grandiflora
Cagra.0802s0015 10.0kb upstream 10.0kb upstream 10708 true Scaffold802: 24367-35074 Capsella grandiflora
Cagra.0802s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold802: 24367-34366 Capsella grandiflora
Cagra.0802s0015 10.0kb downstream 10.0kb downstream 712 true Scaffold802: 34367-35078 Capsella grandiflora
Cagra.0802s0015 10.0kb downstream 10.0kb downstream 4 false Scaffold802: 35075-35078 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377765 5261 Brassicaceae View MSA
123839590 5264 Brassicales-Malvales View MSA
124322624 5266 SBM View MSA
124247827 5268 Malvidae View MSA
124072750 5270 Rosid View MSA
123750989 5271 Pentapetalae View MSA
122787745 5272 Eudicot View MSA
122045868 5273 Angiosperm View MSA
121350043 5274 Embryophyte View MSA
123381553 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain