Gene : Cagra.0802s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31692:SF5 - EXPANSIN-B1-RELATED Genomic Order:  4
Name:  ? Cagra.0802s0004 Secondary Identifier:  ? PAC:28895821
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0802s0004 0.5kb upstream 0.5kb upstream 2115 true Scaffold802: 6896-9010 Capsella grandiflora
Cagra.0802s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold802: 8511-9010 Capsella grandiflora
Cagra.0802s0004 0.5kb downstream 0.5kb downstream 2115 true Scaffold802: 6396-8510 Capsella grandiflora
Cagra.0802s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold802: 6396-6895 Capsella grandiflora
Cagra.0802s0004 1.0kb upstream 1.0kb upstream 2615 true Scaffold802: 6896-9510 Capsella grandiflora
Cagra.0802s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold802: 8511-9510 Capsella grandiflora
Cagra.0802s0004 1.0kb downstream 1.0kb downstream 2615 true Scaffold802: 5896-8510 Capsella grandiflora
Cagra.0802s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold802: 5896-6895 Capsella grandiflora
Cagra.0802s0004 2.0kb upstream 2.0kb upstream 3615 true Scaffold802: 6896-10510 Capsella grandiflora
Cagra.0802s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold802: 8511-10510 Capsella grandiflora
Cagra.0802s0004 2.0kb downstream 2.0kb downstream 3615 true Scaffold802: 4896-8510 Capsella grandiflora
Cagra.0802s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold802: 4896-6895 Capsella grandiflora
Cagra.0802s0004 5.0kb upstream 5.0kb upstream 6615 true Scaffold802: 6896-13510 Capsella grandiflora
Cagra.0802s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold802: 8511-13510 Capsella grandiflora
Cagra.0802s0004 5.0kb downstream 5.0kb downstream 6615 true Scaffold802: 1896-8510 Capsella grandiflora
Cagra.0802s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold802: 1896-6895 Capsella grandiflora
Cagra.0802s0004 10.0kb upstream 10.0kb upstream 11615 true Scaffold802: 6896-18510 Capsella grandiflora
Cagra.0802s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold802: 8511-18510 Capsella grandiflora
Cagra.0802s0004 10.0kb downstream 10.0kb downstream 8510 true Scaffold802: 1-8510 Capsella grandiflora
Cagra.0802s0004 10.0kb downstream 10.0kb downstream 6895 false Scaffold802: 1-6895 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040952 5273 Angiosperm View MSA
122366446 5261 Brassicaceae View MSA
123837344 5264 Brassicales-Malvales View MSA
124322290 5266 SBM View MSA
124169112 5268 Malvidae View MSA
123892263 5270 Rosid View MSA
123742041 5271 Pentapetalae View MSA
122787625 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121351768 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain