Gene : Cagra.0805s0020 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10677 - UBIQUILIN Genomic Order:  20
Name:  ? Cagra.0805s0020 Secondary Identifier:  ? PAC:28901487
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0805s0020 0.5kb upstream 0.5kb upstream 4200 true Scaffold805: 63828-68027 Capsella grandiflora
Cagra.0805s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold805: 67528-68027 Capsella grandiflora
Cagra.0805s0020 0.5kb downstream 0.5kb downstream 4200 true Scaffold805: 63328-67527 Capsella grandiflora
Cagra.0805s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold805: 63328-63827 Capsella grandiflora
Cagra.0805s0020 1.0kb upstream 1.0kb upstream 4700 true Scaffold805: 63828-68527 Capsella grandiflora
Cagra.0805s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold805: 67528-68527 Capsella grandiflora
Cagra.0805s0020 1.0kb downstream 1.0kb downstream 4700 true Scaffold805: 62828-67527 Capsella grandiflora
Cagra.0805s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold805: 62828-63827 Capsella grandiflora
Cagra.0805s0020 2.0kb upstream 2.0kb upstream 5700 true Scaffold805: 63828-69527 Capsella grandiflora
Cagra.0805s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold805: 67528-69527 Capsella grandiflora
Cagra.0805s0020 2.0kb downstream 2.0kb downstream 5700 true Scaffold805: 61828-67527 Capsella grandiflora
Cagra.0805s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold805: 61828-63827 Capsella grandiflora
Cagra.0805s0020 5.0kb upstream 5.0kb upstream 8700 true Scaffold805: 63828-72527 Capsella grandiflora
Cagra.0805s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold805: 67528-72527 Capsella grandiflora
Cagra.0805s0020 5.0kb downstream 5.0kb downstream 8700 true Scaffold805: 58828-67527 Capsella grandiflora
Cagra.0805s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold805: 58828-63827 Capsella grandiflora
Cagra.0805s0020 10.0kb upstream 10.0kb upstream 13700 true Scaffold805: 63828-77527 Capsella grandiflora
Cagra.0805s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold805: 67528-77527 Capsella grandiflora
Cagra.0805s0020 10.0kb downstream 10.0kb downstream 13700 true Scaffold805: 53828-67527 Capsella grandiflora
Cagra.0805s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold805: 53828-63827 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375812 5261 Brassicaceae View MSA
123838531 5264 Brassicales-Malvales View MSA
124343565 5266 SBM View MSA
124239323 5268 Malvidae View MSA
124065561 5270 Rosid View MSA
123740193 5271 Pentapetalae View MSA
122788711 5272 Eudicot View MSA
122045847 5273 Angiosperm View MSA
121343962 5274 Embryophyte View MSA
123426424 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain