Gene : Cagra.0808s0011 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED Genomic Order:  11
Name:  ? Cagra.0808s0011 Secondary Identifier:  ? PAC:28909019
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0808s0011 0.5kb upstream 0.5kb upstream 4733 true Scaffold808: 49031-53763 Capsella grandiflora
Cagra.0808s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold808: 49031-49530 Capsella grandiflora
Cagra.0808s0011 0.5kb downstream 0.5kb downstream 4733 true Scaffold808: 49531-54263 Capsella grandiflora
Cagra.0808s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold808: 53764-54263 Capsella grandiflora
Cagra.0808s0011 1.0kb upstream 1.0kb upstream 5233 true Scaffold808: 48531-53763 Capsella grandiflora
Cagra.0808s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold808: 48531-49530 Capsella grandiflora
Cagra.0808s0011 1.0kb downstream 1.0kb downstream 5233 true Scaffold808: 49531-54763 Capsella grandiflora
Cagra.0808s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold808: 53764-54763 Capsella grandiflora
Cagra.0808s0011 2.0kb upstream 2.0kb upstream 6233 true Scaffold808: 47531-53763 Capsella grandiflora
Cagra.0808s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold808: 47531-49530 Capsella grandiflora
Cagra.0808s0011 2.0kb downstream 2.0kb downstream 6233 true Scaffold808: 49531-55763 Capsella grandiflora
Cagra.0808s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold808: 53764-55763 Capsella grandiflora
Cagra.0808s0011 5.0kb upstream 5.0kb upstream 9233 true Scaffold808: 44531-53763 Capsella grandiflora
Cagra.0808s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold808: 44531-49530 Capsella grandiflora
Cagra.0808s0011 5.0kb downstream 5.0kb downstream 9233 true Scaffold808: 49531-58763 Capsella grandiflora
Cagra.0808s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold808: 53764-58763 Capsella grandiflora
Cagra.0808s0011 10.0kb upstream 10.0kb upstream 14233 true Scaffold808: 39531-53763 Capsella grandiflora
Cagra.0808s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold808: 39531-49530 Capsella grandiflora
Cagra.0808s0011 10.0kb downstream 10.0kb downstream 14233 true Scaffold808: 49531-63763 Capsella grandiflora
Cagra.0808s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold808: 53764-63763 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378758 5261 Brassicaceae View MSA
123836968 5264 Brassicales-Malvales View MSA
124341876 5266 SBM View MSA
124238307 5268 Malvidae View MSA
124061446 5270 Rosid View MSA
123736645 5271 Pentapetalae View MSA
122794174 5272 Eudicot View MSA
122049979 5273 Angiosperm View MSA
121351662 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain