Gene : Cagra.0993s0112 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13068//PTHR13068:SF22 - CGI-12 PROTEIN-RELATED Genomic Order:  112
Name:  ? Cagra.0993s0112 Secondary Identifier:  ? PAC:28903447
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0112 0.5kb upstream 0.5kb upstream 1778 true Scaffold993: 401507-403284 Capsella grandiflora
Cagra.0993s0112 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 401507-402006 Capsella grandiflora
Cagra.0993s0112 0.5kb downstream 0.5kb downstream 1778 true Scaffold993: 402007-403784 Capsella grandiflora
Cagra.0993s0112 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 403285-403784 Capsella grandiflora
Cagra.0993s0112 1.0kb upstream 1.0kb upstream 2278 true Scaffold993: 401007-403284 Capsella grandiflora
Cagra.0993s0112 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 401007-402006 Capsella grandiflora
Cagra.0993s0112 1.0kb downstream 1.0kb downstream 2278 true Scaffold993: 402007-404284 Capsella grandiflora
Cagra.0993s0112 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 403285-404284 Capsella grandiflora
Cagra.0993s0112 2.0kb upstream 2.0kb upstream 3278 true Scaffold993: 400007-403284 Capsella grandiflora
Cagra.0993s0112 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 400007-402006 Capsella grandiflora
Cagra.0993s0112 2.0kb downstream 2.0kb downstream 3278 true Scaffold993: 402007-405284 Capsella grandiflora
Cagra.0993s0112 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 403285-405284 Capsella grandiflora
Cagra.0993s0112 5.0kb upstream 5.0kb upstream 6278 true Scaffold993: 397007-403284 Capsella grandiflora
Cagra.0993s0112 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 397007-402006 Capsella grandiflora
Cagra.0993s0112 5.0kb downstream 5.0kb downstream 6278 true Scaffold993: 402007-408284 Capsella grandiflora
Cagra.0993s0112 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 403285-408284 Capsella grandiflora
Cagra.0993s0112 10.0kb upstream 10.0kb upstream 11278 true Scaffold993: 392007-403284 Capsella grandiflora
Cagra.0993s0112 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 392007-402006 Capsella grandiflora
Cagra.0993s0112 10.0kb downstream 10.0kb downstream 11278 true Scaffold993: 402007-413284 Capsella grandiflora
Cagra.0993s0112 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 403285-413284 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373529 5261 Brassicaceae View MSA
123830621 5264 Brassicales-Malvales View MSA
124342719 5266 SBM View MSA
124251019 5268 Malvidae View MSA
124067504 5270 Rosid View MSA
123741152 5271 Pentapetalae View MSA
122793489 5272 Eudicot View MSA
122047592 5273 Angiosperm View MSA
121347961 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain