Gene : Cagra.0993s0121 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24322:SF510 - ALCOHOL DEHYDROGENASE (ATA1) Genomic Order:  121
Name:  ? Cagra.0993s0121 Secondary Identifier:  ? PAC:28903432
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-695 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0121 0.5kb upstream 0.5kb upstream 1531 true Scaffold993: 446059-447589 Capsella grandiflora
Cagra.0993s0121 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 446059-446558 Capsella grandiflora
Cagra.0993s0121 0.5kb downstream 0.5kb downstream 1531 true Scaffold993: 446559-448089 Capsella grandiflora
Cagra.0993s0121 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 447590-448089 Capsella grandiflora
Cagra.0993s0121 1.0kb upstream 1.0kb upstream 2031 true Scaffold993: 445559-447589 Capsella grandiflora
Cagra.0993s0121 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 445559-446558 Capsella grandiflora
Cagra.0993s0121 1.0kb downstream 1.0kb downstream 2031 true Scaffold993: 446559-448589 Capsella grandiflora
Cagra.0993s0121 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 447590-448589 Capsella grandiflora
Cagra.0993s0121 2.0kb upstream 2.0kb upstream 3031 true Scaffold993: 444559-447589 Capsella grandiflora
Cagra.0993s0121 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 444559-446558 Capsella grandiflora
Cagra.0993s0121 2.0kb downstream 2.0kb downstream 3031 true Scaffold993: 446559-449589 Capsella grandiflora
Cagra.0993s0121 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 447590-449589 Capsella grandiflora
Cagra.0993s0121 5.0kb upstream 5.0kb upstream 6031 true Scaffold993: 441559-447589 Capsella grandiflora
Cagra.0993s0121 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 441559-446558 Capsella grandiflora
Cagra.0993s0121 5.0kb downstream 5.0kb downstream 6031 true Scaffold993: 446559-452589 Capsella grandiflora
Cagra.0993s0121 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 447590-452589 Capsella grandiflora
Cagra.0993s0121 10.0kb upstream 10.0kb upstream 11031 true Scaffold993: 436559-447589 Capsella grandiflora
Cagra.0993s0121 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 436559-446558 Capsella grandiflora
Cagra.0993s0121 10.0kb downstream 10.0kb downstream 6888 true Scaffold993: 446559-453446 Capsella grandiflora
Cagra.0993s0121 10.0kb downstream 10.0kb downstream 5857 false Scaffold993: 447590-453446 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371736 5261 Brassicaceae View MSA
123827401 5264 Brassicales-Malvales View MSA
124342614 5266 SBM View MSA
124239258 5268 Malvidae View MSA
124061755 5270 Rosid View MSA
123748267 5271 Pentapetalae View MSA
122788265 5272 Eudicot View MSA
122042997 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain