Gene : Cagra.0993s0025 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31521:SF2 - EXPRESSED PROTEIN Genomic Order:  25
Name:  ? Cagra.0993s0025 Secondary Identifier:  ? PAC:28903440
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0025 0.5kb upstream 0.5kb upstream 3385 true Scaffold993: 81881-85265 Capsella grandiflora
Cagra.0993s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 84766-85265 Capsella grandiflora
Cagra.0993s0025 0.5kb downstream 0.5kb downstream 3385 true Scaffold993: 81381-84765 Capsella grandiflora
Cagra.0993s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 81381-81880 Capsella grandiflora
Cagra.0993s0025 1.0kb upstream 1.0kb upstream 3885 true Scaffold993: 81881-85765 Capsella grandiflora
Cagra.0993s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 84766-85765 Capsella grandiflora
Cagra.0993s0025 1.0kb downstream 1.0kb downstream 3885 true Scaffold993: 80881-84765 Capsella grandiflora
Cagra.0993s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 80881-81880 Capsella grandiflora
Cagra.0993s0025 2.0kb upstream 2.0kb upstream 4885 true Scaffold993: 81881-86765 Capsella grandiflora
Cagra.0993s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 84766-86765 Capsella grandiflora
Cagra.0993s0025 2.0kb downstream 2.0kb downstream 4885 true Scaffold993: 79881-84765 Capsella grandiflora
Cagra.0993s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 79881-81880 Capsella grandiflora
Cagra.0993s0025 5.0kb upstream 5.0kb upstream 7885 true Scaffold993: 81881-89765 Capsella grandiflora
Cagra.0993s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 84766-89765 Capsella grandiflora
Cagra.0993s0025 5.0kb downstream 5.0kb downstream 7885 true Scaffold993: 76881-84765 Capsella grandiflora
Cagra.0993s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 76881-81880 Capsella grandiflora
Cagra.0993s0025 10.0kb upstream 10.0kb upstream 12885 true Scaffold993: 81881-94765 Capsella grandiflora
Cagra.0993s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 84766-94765 Capsella grandiflora
Cagra.0993s0025 10.0kb downstream 10.0kb downstream 12885 true Scaffold993: 71881-84765 Capsella grandiflora
Cagra.0993s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 71881-81880 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375157 5261 Brassicaceae View MSA
123840776 5264 Brassicales-Malvales View MSA
124344511 5266 SBM View MSA
124245669 5268 Malvidae View MSA
124069914 5270 Rosid View MSA
123749544 5271 Pentapetalae View MSA
122793000 5272 Eudicot View MSA
122042486 5273 Angiosperm View MSA
121345558 5274 Embryophyte View MSA
123380236 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain