Gene : Cagra.0993s0060 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21087:SF0 - INACTIVE SHIKIMATE KINASE LIKE 2, CHLOROPLASTIC-RELATED Genomic Order:  60
Name:  ? Cagra.0993s0060 Secondary Identifier:  ? PAC:28903426
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0993s0060 0.5kb upstream 0.5kb upstream 2626 true Scaffold993: 187707-190332 Capsella grandiflora
Cagra.0993s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold993: 187707-188206 Capsella grandiflora
Cagra.0993s0060 0.5kb downstream 0.5kb downstream 2626 true Scaffold993: 188207-190832 Capsella grandiflora
Cagra.0993s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold993: 190333-190832 Capsella grandiflora
Cagra.0993s0060 1.0kb upstream 1.0kb upstream 3126 true Scaffold993: 187207-190332 Capsella grandiflora
Cagra.0993s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold993: 187207-188206 Capsella grandiflora
Cagra.0993s0060 1.0kb downstream 1.0kb downstream 3126 true Scaffold993: 188207-191332 Capsella grandiflora
Cagra.0993s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold993: 190333-191332 Capsella grandiflora
Cagra.0993s0060 2.0kb upstream 2.0kb upstream 4126 true Scaffold993: 186207-190332 Capsella grandiflora
Cagra.0993s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold993: 186207-188206 Capsella grandiflora
Cagra.0993s0060 2.0kb downstream 2.0kb downstream 4126 true Scaffold993: 188207-192332 Capsella grandiflora
Cagra.0993s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold993: 190333-192332 Capsella grandiflora
Cagra.0993s0060 5.0kb upstream 5.0kb upstream 7126 true Scaffold993: 183207-190332 Capsella grandiflora
Cagra.0993s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold993: 183207-188206 Capsella grandiflora
Cagra.0993s0060 5.0kb downstream 5.0kb downstream 7126 true Scaffold993: 188207-195332 Capsella grandiflora
Cagra.0993s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold993: 190333-195332 Capsella grandiflora
Cagra.0993s0060 10.0kb upstream 10.0kb upstream 12126 true Scaffold993: 178207-190332 Capsella grandiflora
Cagra.0993s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold993: 178207-188206 Capsella grandiflora
Cagra.0993s0060 10.0kb downstream 10.0kb downstream 12126 true Scaffold993: 188207-200332 Capsella grandiflora
Cagra.0993s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold993: 190333-200332 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367446 5261 Brassicaceae View MSA
123827628 5264 Brassicales-Malvales View MSA
124339752 5266 SBM View MSA
124237688 5268 Malvidae View MSA
124072915 5270 Rosid View MSA
123746382 5271 Pentapetalae View MSA
122790414 5272 Eudicot View MSA
122043641 5273 Angiosperm View MSA
121347570 5274 Embryophyte View MSA
123427676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain