Gene : Cagra.0946s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR34953:SF1 - ALPHA/BETA HYDROLASE RELATED PROTEIN Genomic Order:  7
Name:  ? Cagra.0946s0007 Secondary Identifier:  ? PAC:28901671
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0946s0007 0.5kb upstream 0.5kb upstream 1976 true Scaffold946: 35245-37220 Capsella grandiflora
Cagra.0946s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold946: 36721-37220 Capsella grandiflora
Cagra.0946s0007 0.5kb downstream 0.5kb downstream 1976 true Scaffold946: 34745-36720 Capsella grandiflora
Cagra.0946s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold946: 34745-35244 Capsella grandiflora
Cagra.0946s0007 1.0kb upstream 1.0kb upstream 2476 true Scaffold946: 35245-37720 Capsella grandiflora
Cagra.0946s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold946: 36721-37720 Capsella grandiflora
Cagra.0946s0007 1.0kb downstream 1.0kb downstream 2476 true Scaffold946: 34245-36720 Capsella grandiflora
Cagra.0946s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold946: 34245-35244 Capsella grandiflora
Cagra.0946s0007 2.0kb upstream 2.0kb upstream 3476 true Scaffold946: 35245-38720 Capsella grandiflora
Cagra.0946s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold946: 36721-38720 Capsella grandiflora
Cagra.0946s0007 2.0kb downstream 2.0kb downstream 3476 true Scaffold946: 33245-36720 Capsella grandiflora
Cagra.0946s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold946: 33245-35244 Capsella grandiflora
Cagra.0946s0007 5.0kb upstream 5.0kb upstream 6476 true Scaffold946: 35245-41720 Capsella grandiflora
Cagra.0946s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold946: 36721-41720 Capsella grandiflora
Cagra.0946s0007 5.0kb downstream 5.0kb downstream 6476 true Scaffold946: 30245-36720 Capsella grandiflora
Cagra.0946s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold946: 30245-35244 Capsella grandiflora
Cagra.0946s0007 10.0kb upstream 10.0kb upstream 11476 true Scaffold946: 35245-46720 Capsella grandiflora
Cagra.0946s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold946: 36721-46720 Capsella grandiflora
Cagra.0946s0007 10.0kb downstream 10.0kb downstream 11476 true Scaffold946: 25245-36720 Capsella grandiflora
Cagra.0946s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold946: 25245-35244 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334510 5261 Brassicaceae Singleton cluster - no MSA
123775336 5264 Brassicales-Malvales Singleton cluster - no MSA
124273746 5266 SBM Singleton cluster - no MSA
124249926 5268 Malvidae View MSA
123952441 5270 Rosid View MSA
123753600 5271 Pentapetalae View MSA
122789724 5272 Eudicot View MSA
122045199 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121343939 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain