Gene : Cagra.0946s0027 C. grandiflora v1.1
Defline:  (1 of 15) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  27
Name:  ? Cagra.0946s0027 Secondary Identifier:  ? PAC:28901668
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0946s0027 0.5kb upstream 0.5kb upstream 1789 true Scaffold946: 103615-105403 Capsella grandiflora
Cagra.0946s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold946: 103615-104114 Capsella grandiflora
Cagra.0946s0027 0.5kb downstream 0.5kb downstream 1789 true Scaffold946: 104115-105903 Capsella grandiflora
Cagra.0946s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold946: 105404-105903 Capsella grandiflora
Cagra.0946s0027 1.0kb upstream 1.0kb upstream 2289 true Scaffold946: 103115-105403 Capsella grandiflora
Cagra.0946s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold946: 103115-104114 Capsella grandiflora
Cagra.0946s0027 1.0kb downstream 1.0kb downstream 2289 true Scaffold946: 104115-106403 Capsella grandiflora
Cagra.0946s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold946: 105404-106403 Capsella grandiflora
Cagra.0946s0027 2.0kb upstream 2.0kb upstream 3289 true Scaffold946: 102115-105403 Capsella grandiflora
Cagra.0946s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold946: 102115-104114 Capsella grandiflora
Cagra.0946s0027 2.0kb downstream 2.0kb downstream 3289 true Scaffold946: 104115-107403 Capsella grandiflora
Cagra.0946s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold946: 105404-107403 Capsella grandiflora
Cagra.0946s0027 5.0kb upstream 5.0kb upstream 6289 true Scaffold946: 99115-105403 Capsella grandiflora
Cagra.0946s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold946: 99115-104114 Capsella grandiflora
Cagra.0946s0027 5.0kb downstream 5.0kb downstream 6289 true Scaffold946: 104115-110403 Capsella grandiflora
Cagra.0946s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold946: 105404-110403 Capsella grandiflora
Cagra.0946s0027 10.0kb upstream 10.0kb upstream 11289 true Scaffold946: 94115-105403 Capsella grandiflora
Cagra.0946s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold946: 94115-104114 Capsella grandiflora
Cagra.0946s0027 10.0kb downstream 10.0kb downstream 11289 true Scaffold946: 104115-115403 Capsella grandiflora
Cagra.0946s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold946: 105404-115403 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041273 5273 Angiosperm View MSA
122379003 5261 Brassicaceae View MSA
123802062 5264 Brassicales-Malvales View MSA
124299285 5266 SBM View MSA
124250780 5268 Malvidae View MSA
124066050 5270 Rosid View MSA
123742828 5271 Pentapetalae View MSA
122791764 5272 Eudicot View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain