Gene : Cagra.0925s0005 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  5
Name:  ? Cagra.0925s0005 Secondary Identifier:  ? PAC:28917172
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0925s0005 0.5kb upstream 0.5kb upstream 2380 true Scaffold925: 18437-20816 Capsella grandiflora
Cagra.0925s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold925: 20317-20816 Capsella grandiflora
Cagra.0925s0005 0.5kb downstream 0.5kb downstream 2380 true Scaffold925: 17937-20316 Capsella grandiflora
Cagra.0925s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold925: 17937-18436 Capsella grandiflora
Cagra.0925s0005 1.0kb upstream 1.0kb upstream 2880 true Scaffold925: 18437-21316 Capsella grandiflora
Cagra.0925s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold925: 20317-21316 Capsella grandiflora
Cagra.0925s0005 1.0kb downstream 1.0kb downstream 2880 true Scaffold925: 17437-20316 Capsella grandiflora
Cagra.0925s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold925: 17437-18436 Capsella grandiflora
Cagra.0925s0005 2.0kb upstream 2.0kb upstream 3880 true Scaffold925: 18437-22316 Capsella grandiflora
Cagra.0925s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold925: 20317-22316 Capsella grandiflora
Cagra.0925s0005 2.0kb downstream 2.0kb downstream 3880 true Scaffold925: 16437-20316 Capsella grandiflora
Cagra.0925s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold925: 16437-18436 Capsella grandiflora
Cagra.0925s0005 5.0kb upstream 5.0kb upstream 6880 true Scaffold925: 18437-25316 Capsella grandiflora
Cagra.0925s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold925: 20317-25316 Capsella grandiflora
Cagra.0925s0005 5.0kb downstream 5.0kb downstream 6880 true Scaffold925: 13437-20316 Capsella grandiflora
Cagra.0925s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold925: 13437-18436 Capsella grandiflora
Cagra.0925s0005 10.0kb upstream 10.0kb upstream 11880 true Scaffold925: 18437-30316 Capsella grandiflora
Cagra.0925s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold925: 20317-30316 Capsella grandiflora
Cagra.0925s0005 10.0kb downstream 10.0kb downstream 11880 true Scaffold925: 8437-20316 Capsella grandiflora
Cagra.0925s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold925: 8437-18436 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372479 5261 Brassicaceae View MSA
123834422 5264 Brassicales-Malvales View MSA
124337922 5266 SBM View MSA
124241868 5268 Malvidae View MSA
124064129 5270 Rosid View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain